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  5. Cre12.g486250

Cre12.g486250


Description : Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein recruiting.ARF-GTPase


Gene families : OG0000310 (Archaeplastida) Phylogenetic Tree(s): OG0000310_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g486250
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
AT1G10630 ATARFA1F, ARFA1F ADP-ribosylation factor A1F 0.02 Archaeplastida
AT2G24765 ATARL1, ARF3, ARL1 ADP-ribosylation factor 3 0.01 Archaeplastida
AT2G47170 ARF1A1C Ras-related small GTP-binding family protein 0.03 Archaeplastida
Cpa|evm.model.tig00021127.129 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 Archaeplastida
GSVIVT01013765001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 Archaeplastida
GSVIVT01017654001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 Archaeplastida
Gb_25641 No alias ARF-GTPase 0.03 Archaeplastida
LOC_Os07g12200.1 No alias ARF-GTPase 0.02 Archaeplastida
LOC_Os08g15040.1 No alias ARF-GTPase 0.01 Archaeplastida
MA_24477g0010 No alias ARF-GTPase 0.02 Archaeplastida
MA_4349g0020 No alias ARF-GTPase 0.01 Archaeplastida
Mp3g13920.1 No alias ARF-GTPase 0.01 Archaeplastida
Mp8g07320.1 No alias ARF-GTPase 0.03 Archaeplastida
Pp3c12_14945V3.1 No alias ADP-ribosylation factor A1E 0.1 Archaeplastida
Pp3c9_17560V3.1 No alias ADP-ribosylation factor 3 0.01 Archaeplastida
Solyc01g008000.3.1 No alias ARF-GTPase 0.03 Archaeplastida
Zm00001e011790_P001 No alias ARF-GTPase 0.04 Archaeplastida
Zm00001e021566_P001 No alias ARF-GTPase 0.01 Archaeplastida
Zm00001e025541_P003 No alias ARF-GTPase 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006473 protein acetylation IEP Neighborhood
BP GO:0006475 internal protein amino acid acetylation IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0016407 acetyltransferase activity IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016573 histone acetylation IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0018393 internal peptidyl-lysine acetylation IEP Neighborhood
BP GO:0018394 peptidyl-lysine acetylation IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
BP GO:0043543 protein acylation IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
InterPro domains Description Start Stop
IPR006689 Small_GTPase_ARF/SAR 6 177
No external refs found!