Cre12.g492950

Description : Nucleotide metabolism.deoxynucleotide metabolism.ribonucleoside-diphosphate reductase dimer.large subunit

Gene families : OG0002474 (Archaeplastida) Phylogenetic Tree(s): OG0002474_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre12.g492950
Cluster	HCCA: Cluster_110

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00125090	evm_27.TU.AmTr_v1...	Ribonucleoside-diphosphate reductase large subunit...	0.03	Archaeplastida
AMTR_s00017p00232600	evm_27.TU.AmTr_v1...	Nucleotide metabolism.deoxynucleotide...	0.04	Archaeplastida
AT2G21790	CLS8, RNR1, ATRNR1, R1	ribonucleotide reductase 1	0.08	Archaeplastida
Cpa\|evm.model.tig00001042.1	No alias	Ribonucleoside-diphosphate reductase large subunit...	0.03	Archaeplastida
GSVIVT01022278001	No alias	Nucleotide metabolism.deoxynucleotide...	0.04	Archaeplastida
Gb_15263	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.17...	0.08	Archaeplastida
Gb_21933	No alias	large subunit of ribonucleoside-diphosphate reductase heterodimer	0.02	Archaeplastida
LOC_Os02g56100.1	No alias	large subunit of ribonucleoside-diphosphate reductase heterodimer	0.03	Archaeplastida
LOC_Os06g07210.1	No alias	large subunit of ribonucleoside-diphosphate reductase heterodimer	0.07	Archaeplastida
MA_10435382g0010	No alias	large subunit of ribonucleoside-diphosphate reductase heterodimer	0.1	Archaeplastida
MA_158556g0010	No alias	large subunit of ribonucleoside-diphosphate reductase heterodimer	0.02	Archaeplastida
Mp2g00850.1	No alias	large subunit of ribonucleoside-diphosphate reductase heterodimer	0.1	Archaeplastida
Pp3c5_8430V3.1	No alias	ribonucleotide reductase 1	0.02	Archaeplastida
Pp3c6_14810V3.1	No alias	ribonucleotide reductase 1	0.02	Archaeplastida
Solyc04g012060.3.1	No alias	large subunit of ribonucleoside-diphosphate reductase heterodimer	0.03	Archaeplastida
Solyc04g051350.3.1	No alias	large subunit of ribonucleoside-diphosphate reductase heterodimer	0.08	Archaeplastida
Zm00001e030111_P001	No alias	large subunit of ribonucleoside-diphosphate reductase heterodimer	0.05	Archaeplastida
Zm00001e036393_P001	No alias	large subunit of ribonucleoside-diphosphate reductase heterodimer	0.11	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006260	DNA replication	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0055114	oxidation-reduction process	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Neighborhood
MF	GO:0003674	molecular_function	IEP	Neighborhood
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003677	DNA binding	IEP	Neighborhood
MF	GO:0003896	DNA primase activity	IEP	Neighborhood
MF	GO:0003924	GTPase activity	IEP	Neighborhood
MF	GO:0004146	dihydrofolate reductase activity	IEP	Neighborhood
MF	GO:0005488	binding	IEP	Neighborhood
MF	GO:0005524	ATP binding	IEP	Neighborhood
BP	GO:0006269	DNA replication, synthesis of RNA primer	IEP	Neighborhood
BP	GO:0006270	DNA replication initiation	IEP	Neighborhood
BP	GO:0006275	regulation of DNA replication	IEP	Neighborhood
BP	GO:0006575	cellular modified amino acid metabolic process	IEP	Neighborhood
BP	GO:0006760	folic acid-containing compound metabolic process	IEP	Neighborhood
MF	GO:0008144	drug binding	IEP	Neighborhood
MF	GO:0008484	sulfuric ester hydrolase activity	IEP	Neighborhood
BP	GO:0009396	folic acid-containing compound biosynthetic process	IEP	Neighborhood
BP	GO:0010564	regulation of cell cycle process	IEP	Neighborhood
BP	GO:0010639	negative regulation of organelle organization	IEP	Neighborhood
BP	GO:0010824	regulation of centrosome duplication	IEP	Neighborhood
BP	GO:0010826	negative regulation of centrosome duplication	IEP	Neighborhood
BP	GO:0010948	negative regulation of cell cycle process	IEP	Neighborhood
MF	GO:0016462	pyrophosphatase activity	IEP	Neighborhood
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	IEP	Neighborhood
MF	GO:0016646	oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor	IEP	Neighborhood
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Neighborhood
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Neighborhood
MF	GO:0017076	purine nucleotide binding	IEP	Neighborhood
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Neighborhood
BP	GO:0030030	cell projection organization	IEP	Neighborhood
BP	GO:0030031	cell projection assembly	IEP	Neighborhood
MF	GO:0030554	adenyl nucleotide binding	IEP	Neighborhood
MF	GO:0032553	ribonucleotide binding	IEP	Neighborhood
MF	GO:0032555	purine ribonucleotide binding	IEP	Neighborhood
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Neighborhood
BP	GO:0032886	regulation of microtubule-based process	IEP	Neighborhood
BP	GO:0033043	regulation of organelle organization	IEP	Neighborhood
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Neighborhood
CC	GO:0036038	MKS complex	IEP	Neighborhood
MF	GO:0036094	small molecule binding	IEP	Neighborhood
BP	GO:0042398	cellular modified amino acid biosynthetic process	IEP	Neighborhood
BP	GO:0042558	pteridine-containing compound metabolic process	IEP	Neighborhood
BP	GO:0042559	pteridine-containing compound biosynthetic process	IEP	Neighborhood
MF	GO:0043167	ion binding	IEP	Neighborhood
MF	GO:0043168	anion binding	IEP	Neighborhood
CC	GO:0044441	ciliary part	IEP	Neighborhood
CC	GO:0044463	cell projection part	IEP	Neighborhood
BP	GO:0044782	cilium organization	IEP	Neighborhood
BP	GO:0045786	negative regulation of cell cycle	IEP	Neighborhood
BP	GO:0046605	regulation of centrosome cycle	IEP	Neighborhood
BP	GO:0046606	negative regulation of centrosome cycle	IEP	Neighborhood
BP	GO:0046653	tetrahydrofolate metabolic process	IEP	Neighborhood
BP	GO:0046654	tetrahydrofolate biosynthetic process	IEP	Neighborhood
BP	GO:0048519	negative regulation of biological process	IEP	Neighborhood
BP	GO:0048523	negative regulation of cellular process	IEP	Neighborhood
BP	GO:0051052	regulation of DNA metabolic process	IEP	Neighborhood
BP	GO:0051128	regulation of cellular component organization	IEP	Neighborhood
BP	GO:0051129	negative regulation of cellular component organization	IEP	Neighborhood
BP	GO:0051493	regulation of cytoskeleton organization	IEP	Neighborhood
BP	GO:0051494	negative regulation of cytoskeleton organization	IEP	Neighborhood
BP	GO:0051726	regulation of cell cycle	IEP	Neighborhood
BP	GO:0060271	cilium assembly	IEP	Neighborhood
BP	GO:0070507	regulation of microtubule cytoskeleton organization	IEP	Neighborhood
BP	GO:0070925	organelle assembly	IEP	Neighborhood
MF	GO:0097159	organic cyclic compound binding	IEP	Neighborhood
MF	GO:0097367	carbohydrate derivative binding	IEP	Neighborhood
BP	GO:0120031	plasma membrane bounded cell projection assembly	IEP	Neighborhood
BP	GO:0120036	plasma membrane bounded cell projection organization	IEP	Neighborhood
CC	GO:0120038	plasma membrane bounded cell projection part	IEP	Neighborhood
MF	GO:1901265	nucleoside phosphate binding	IEP	Neighborhood
MF	GO:1901363	heterocyclic compound binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR005144	ATP-cone_dom	4	92
IPR013509	RNR_lsu_N	145	215
IPR000788	RNR_lg_C	219	762

External Links

No external refs found!

Cre12.g492950

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation