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  5. AMTR_s00053p00122010

AMTR_s00053p00122010 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00053.69

Description : Probable calcium-binding protein CML35 OS=Arabidopsis thaliana


Gene families : OG0000031 (Archaeplastida) Phylogenetic Tree(s): OG0000031_tree ,
OG_05_0000085 (LandPlants) Phylogenetic Tree(s): OG_05_0000085_tree ,
OG_06_0000352 (SeedPlants) Phylogenetic Tree(s): OG_06_0000352_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00053p00122010
Cluster HCCA: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
AT2G43290 MSS3 Calcium-binding EF-hand family protein 0.04 Archaeplastida
AT4G37010 CEN2 centrin 2 0.03 Archaeplastida
GSVIVT01011435001 No alias Probable calcium-binding protein CML45 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01018070001 No alias Calmodulin-like protein 11 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01029852001 No alias Calcium-binding allergen Bet v 3 OS=Betula pendula 0.02 Archaeplastida
GSVIVT01033567001 No alias Probable calcium-binding protein CML36 OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_28442 No alias Calmodulin-like protein 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_30819 No alias Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os01g04330.1 No alias Probable calcium-binding protein CML16 OS=Oryza sativa... 0.04 Archaeplastida
LOC_Os01g59530.1 No alias Calmodulin-like protein 1 OS=Oryza sativa subsp.... 0.02 Archaeplastida
LOC_Os01g72080.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os03g21380.2 No alias Probable calcium-binding protein CML27 OS=Oryza sativa... 0.04 Archaeplastida
LOC_Os04g41540.1 No alias Probable calcium-binding protein CML22 OS=Oryza sativa... 0.03 Archaeplastida
LOC_Os07g12240.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os11g04560.1 No alias Probable calcium-binding protein CML36 OS=Arabidopsis... 0.04 Archaeplastida
MA_10432950g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_1190858g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_13199g0010 No alias Probable calcium-binding protein CML27 OS=Oryza sativa... 0.02 Archaeplastida
MA_18054g0010 No alias Probable calcium-binding protein CML32 OS=Oryza sativa... 0.02 Archaeplastida
MA_224196g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_393053g0010 No alias Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_51891g0010 No alias Probable calcium-binding protein CML10 OS=Oryza sativa... 0.02 Archaeplastida
MA_641437g0010 No alias Calcium-binding protein CML42 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_7799814g0010 No alias Calcium-binding protein CML42 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_8749g0010 No alias Calcium-binding protein CML42 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp5g15630.1 No alias Probable calcium-binding protein CML10 OS=Oryza sativa... 0.02 Archaeplastida
Mp6g18000.1 No alias Calmodulin-like protein 3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp6g20470.1 No alias Probable calcium-binding protein CML22 OS=Oryza sativa... 0.03 Archaeplastida
Pp3c12_6540V3.1 No alias EF hand calcium-binding protein family 0.03 Archaeplastida
Pp3c13_2400V3.1 No alias EF hand calcium-binding protein family 0.02 Archaeplastida
Pp3c5_10970V3.1 No alias calmodulin like 23 0.02 Archaeplastida
Smo233632 No alias Calmodulin-like protein 7 OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc03g118810.1.1 No alias Calcium-binding allergen Ole e 8 OS=Olea europaea... 0.03 Archaeplastida
Solyc04g018110.1.1 No alias Probable calcium-binding protein CML35 OS=Arabidopsis... 0.04 Archaeplastida
Solyc06g068960.1.1 No alias Calcium-binding allergen Ole e 8 OS=Olea europaea... 0.02 Archaeplastida
Solyc10g079755.1.1 No alias Probable calcium-binding protein CML36 OS=Arabidopsis... 0.02 Archaeplastida
Solyc10g081170.2.1 No alias Calmodulin-related protein OS=Petunia hybrida... 0.05 Archaeplastida
Zm00001e001557_P001 No alias Probable calcium-binding protein CML27 OS=Oryza sativa... 0.03 Archaeplastida
Zm00001e012873_P001 No alias DNA repair protein (CEN2). centrin component CEN of... 0.03 Archaeplastida
Zm00001e016987_P001 No alias Probable calcium-binding protein CML16 OS=Oryza sativa... 0.03 Archaeplastida
Zm00001e019509_P001 No alias Calmodulin-like protein 1 OS=Oryza sativa subsp. indica... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0015988 energy coupled proton transmembrane transport, against electrochemical gradient IEP Neighborhood
BP GO:0015991 ATP hydrolysis coupled proton transport IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0019829 cation-transporting ATPase activity IEP Neighborhood
MF GO:0022853 active ion transmembrane transporter activity IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Neighborhood
MF GO:0036442 proton-exporting ATPase activity IEP Neighborhood
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Neighborhood
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Neighborhood
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:0090662 ATP hydrolysis coupled transmembrane transport IEP Neighborhood
BP GO:0099131 ATP hydrolysis coupled ion transmembrane transport IEP Neighborhood
BP GO:0099132 ATP hydrolysis coupled cation transmembrane transport IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR011992 EF-hand-dom_pair 161 222
No external refs found!