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  5. Cre12.g498250

Cre12.g498250


Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS17 component


Gene families : OG0002265 (Archaeplastida) Phylogenetic Tree(s): OG0002265_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g498250
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00243530 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.28 Archaeplastida
AT2G04390 No alias Ribosomal S17 family protein 0.11 Archaeplastida
AT2G05220 No alias Ribosomal S17 family protein 0.25 Archaeplastida
AT3G10610 No alias Ribosomal S17 family protein 0.29 Archaeplastida
AT5G04800 No alias Ribosomal S17 family protein 0.2 Archaeplastida
GSVIVT01033920001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.07 Archaeplastida
GSVIVT01034653001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.16 Archaeplastida
LOC_Os03g01900.1 No alias component RPS17 of SSU proteome 0.08 Archaeplastida
LOC_Os10g27190.1 No alias component RPS17 of SSU proteome 0.1 Archaeplastida
MA_184894g0010 No alias component RPS17 of SSU proteome 0.31 Archaeplastida
MA_217540g0010 No alias component RPS17 of SSU proteome 0.02 Archaeplastida
Mp8g18950.1 No alias component RPS17 of SSU proteome 0.39 Archaeplastida
Pp3c11_2530V3.1 No alias Ribosomal S17 family protein 0.3 Archaeplastida
Pp3c11_2540V3.1 No alias Ribosomal S17 family protein 0.37 Archaeplastida
Pp3c2_34780V3.1 No alias Ribosomal S17 family protein 0.32 Archaeplastida
Pp3c7_21070V3.1 No alias Ribosomal S17 family protein 0.11 Archaeplastida
Pp3c7_21140V3.1 No alias Ribosomal S17 family protein 0.35 Archaeplastida
Smo270936 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.22 Archaeplastida
Solyc05g055230.2.1 No alias component RPS17 of SSU proteome 0.29 Archaeplastida
Solyc10g150146.1.1 No alias component RPS17 of SSU proteome 0.38 Archaeplastida
Solyc11g006690.1.1 No alias component RPS17 of SSU proteome 0.19 Archaeplastida
Zm00001e030769_P001 No alias component RPS17 of SSU proteome 0.07 Archaeplastida
Zm00001e036233_P001 No alias component RPS17 of SSU proteome 0.1 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005622 intracellular IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
CC GO:0005747 mitochondrial respiratory chain complex I IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
BP GO:0022900 electron transport chain IEP Neighborhood
CC GO:0030964 NADH dehydrogenase complex IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
CC GO:0045271 respiratory chain complex I IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098800 inner mitochondrial membrane protein complex IEP Neighborhood
CC GO:0098803 respiratory chain complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001210 Ribosomal_S17e 1 121
No external refs found!