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  5. Cre12.g499900

Cre12.g499900


Description : Vesicle trafficking.endomembrane trafficking.protein recycling.Retromer protein recycling complex.VPS29 component


Gene families : OG0005609 (Archaeplastida) Phylogenetic Tree(s): OG0005609_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g499900
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00251310 evm_27.TU.AmTr_v1... Vesicle trafficking.endomembrane trafficking.protein... 0.02 Archaeplastida
GSVIVT01008037001 No alias Vesicle trafficking.endomembrane trafficking.protein... 0.04 Archaeplastida
Pp3c11_12990V3.1 No alias Calcineurin-like metallo-phosphoesterase superfamily protein 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Neighborhood
BP GO:0015693 magnesium ion transport IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0030145 manganese ion binding IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0070838 divalent metal ion transport IEP Neighborhood
BP GO:0072511 divalent inorganic cation transport IEP Neighborhood
InterPro domains Description Start Stop
IPR024654 Calcineurin-like_PHP_lpxH 4 160
No external refs found!