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  5. Cre12.g504200

Cre12.g504200


Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS23 component


Gene families : OG0001653 (Archaeplastida) Phylogenetic Tree(s): OG0001653_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g504200
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00204160 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.16 Archaeplastida
AT3G09680 No alias Ribosomal protein S12/S23 family protein 0.04 Archaeplastida
AT5G02960 No alias Ribosomal protein S12/S23 family protein 0.39 Archaeplastida
Cpa|evm.model.tig00001264.27 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.25 Archaeplastida
GSVIVT01016341001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.27 Archaeplastida
GSVIVT01025120001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.26 Archaeplastida
GSVIVT01025626001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.18 Archaeplastida
Gb_02361 No alias component RPS23 of SSU proteome 0.19 Archaeplastida
Gb_36570 No alias component RPS23 of SSU proteome 0.23 Archaeplastida
LOC_Os01g61814.1 No alias component RPS23 of SSU proteome 0.34 Archaeplastida
LOC_Os03g60400.1 No alias component RPS23 of SSU proteome 0.26 Archaeplastida
MA_10436470g0020 No alias component RPS23 of SSU proteome 0.24 Archaeplastida
MA_19871g0020 No alias component RPS23 of SSU proteome 0.1 Archaeplastida
MA_9043057g0010 No alias component RPS23 of SSU proteome 0.1 Archaeplastida
Mp2g08680.1 No alias component RPS23 of SSU proteome 0.39 Archaeplastida
Pp3c11_11070V3.1 No alias Ribosomal protein S12/S23 family protein 0.34 Archaeplastida
Pp3c12_25120V3.1 No alias Ribosomal protein S12/S23 family protein 0.26 Archaeplastida
Pp3c2_24130V3.1 No alias Ribosomal protein S12/S23 family protein 0.42 Archaeplastida
Pp3c4_3120V3.1 No alias Ribosomal protein S12/S23 family protein 0.32 Archaeplastida
Pp3c7_14200V3.1 No alias Ribosomal protein S12/S23 family protein 0.34 Archaeplastida
Smo145246 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.14 Archaeplastida
Solyc06g005110.3.1 No alias 40S ribosomal protein S23 OS=Fragaria ananassa... 0.04 Archaeplastida
Solyc09g007350.3.1 No alias component RPS23 of SSU proteome 0.33 Archaeplastida
Solyc10g084310.2.1 No alias component RPS23 of SSU proteome 0.34 Archaeplastida
Solyc10g086020.3.1 No alias component RPS23 of SSU proteome 0.35 Archaeplastida
Zm00001e006170_P001 No alias component RPS23 of SSU proteome 0.28 Archaeplastida
Zm00001e011770_P001 No alias component RPS23 of SSU proteome 0.19 Archaeplastida
Zm00001e019377_P001 No alias component RPS23 of SSU proteome 0.34 Archaeplastida
Zm00001e027265_P001 No alias component RPS23 of SSU proteome 0.28 Archaeplastida
Zm00001e031855_P001 No alias component RPS23 of SSU proteome 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
CC GO:0005743 mitochondrial inner membrane IEP Neighborhood
CC GO:0005747 mitochondrial respiratory chain complex I IEP Neighborhood
CC GO:0005750 mitochondrial respiratory chain complex III IEP Neighborhood
BP GO:0006091 generation of precursor metabolites and energy IEP Neighborhood
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0019866 organelle inner membrane IEP Neighborhood
BP GO:0022900 electron transport chain IEP Neighborhood
BP GO:0022904 respiratory electron transport chain IEP Neighborhood
CC GO:0030964 NADH dehydrogenase complex IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
CC GO:0045271 respiratory chain complex I IEP Neighborhood
CC GO:0045275 respiratory chain complex III IEP Neighborhood
CC GO:0070069 cytochrome complex IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098800 inner mitochondrial membrane protein complex IEP Neighborhood
CC GO:0098803 respiratory chain complex IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR006032 Ribosomal_S12/S23 31 141
No external refs found!