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  5. Cre12.g515850

Cre12.g515850


Description : Cell cycle.interphase.DNA replication.elongation.DNA-tracking platform.PCNA sliding clamp protein


Gene families : OG0003952 (Archaeplastida) Phylogenetic Tree(s): OG0003952_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g515850
Cluster HCCA: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00259890 evm_27.TU.AmTr_v1... Cell cycle.interphase.DNA... 0.04 Archaeplastida
AMTR_s00029p00198200 evm_27.TU.AmTr_v1... Cell cycle.interphase.DNA... 0.04 Archaeplastida
AT1G07370 ATPCNA1, PCNA1 proliferating cellular nuclear antigen 1 0.03 Archaeplastida
Cpa|evm.model.tig00020553.141 No alias Cell cycle.interphase.DNA... 0.07 Archaeplastida
Cpa|evm.model.tig00021319.67 No alias Cell cycle.interphase.DNA... 0.06 Archaeplastida
GSVIVT01024815001 No alias Cell cycle.interphase.DNA... 0.05 Archaeplastida
Gb_11143 No alias sliding clamp protein (PCNA) 0.07 Archaeplastida
LOC_Os02g56130.1 No alias sliding clamp protein (PCNA) 0.05 Archaeplastida
MA_83835g0010 No alias sliding clamp protein (PCNA) 0.08 Archaeplastida
Mp2g02690.1 No alias sliding clamp protein (PCNA) 0.02 Archaeplastida
Pp3c12_18160V3.1 No alias proliferating cellular nuclear antigen 1 0.03 Archaeplastida
Pp3c4_11630V3.1 No alias proliferating cellular nuclear antigen 1 0.03 Archaeplastida
Solyc06g076660.3.1 No alias sliding clamp protein (PCNA) 0.05 Archaeplastida
Zm00001e016159_P001 No alias sliding clamp protein (PCNA) 0.08 Archaeplastida
Zm00001e023660_P001 No alias sliding clamp protein (PCNA) 0.08 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006275 regulation of DNA replication IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
BP GO:0000226 microtubule cytoskeleton organization IEP Neighborhood
CC GO:0000444 MIS12/MIND type complex IEP Neighborhood
CC GO:0000818 nuclear MIS12/MIND complex IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005815 microtubule organizing center IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006270 DNA replication initiation IEP Neighborhood
BP GO:0006401 RNA catabolic process IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0007062 sister chromatid cohesion IEP Neighborhood
BP GO:0007064 mitotic sister chromatid cohesion IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0019207 kinase regulator activity IEP Neighborhood
MF GO:0019887 protein kinase regulator activity IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
CC GO:0031390 Ctf18 RFC-like complex IEP Neighborhood
CC GO:0032299 ribonuclease H2 complex IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0034453 microtubule anchoring IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1903047 mitotic cell cycle process IEP Neighborhood
InterPro domains Description Start Stop
IPR022648 Pr_cel_nuc_antig_N 1 123
IPR022649 Pr_cel_nuc_antig_C 127 254
No external refs found!