Cre12.g519700

Description : GTP-binding protein At2g22870 OS=Arabidopsis thaliana

Gene families : OG0002550 (Archaeplastida) Phylogenetic Tree(s): OG0002550_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre12.g519700
Cluster	HCCA: Cluster_118

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00065p00125910	evm_27.TU.AmTr_v1...	GTP-binding protein At2g22870 OS=Arabidopsis thaliana	0.02	Archaeplastida
AT5G11480	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.03	Archaeplastida
Cpa\|evm.model.tig00000114.47	No alias	GTP-binding protein At2g22870 OS=Arabidopsis thaliana	0.01	Archaeplastida
GSVIVT01035676001	No alias	GTP-binding protein At2g22870 OS=Arabidopsis thaliana	0.01	Archaeplastida
Gb_20375	No alias	GTP-binding protein At2g22870 OS=Arabidopsis thaliana...	0.01	Archaeplastida
LOC_Os01g53150.2	No alias	GTP-binding protein At2g22870 OS=Arabidopsis thaliana...	0.01	Archaeplastida
Pp3c3_19710V3.1	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.02	Archaeplastida
Smo110012	No alias	GTP-binding protein At2g22870 OS=Arabidopsis thaliana	0.01	Archaeplastida
Zm00001e038655_P001	No alias	GTP-binding protein At2g22870 OS=Arabidopsis thaliana...	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0001882	nucleoside binding	None	Extended
MF	GO:0001883	purine nucleoside binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032549	ribonucleoside binding	None	Extended
MF	GO:0032550	purine ribonucleoside binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003723	RNA binding	IEP	Neighborhood
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006396	RNA processing	IEP	Neighborhood
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Neighborhood
BP	GO:0006807	nitrogen compound metabolic process	IEP	Neighborhood
MF	GO:0008168	methyltransferase activity	IEP	Neighborhood
MF	GO:0008173	RNA methyltransferase activity	IEP	Neighborhood
BP	GO:0016070	RNA metabolic process	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Neighborhood
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0043170	macromolecule metabolic process	IEP	Neighborhood
BP	GO:0044237	cellular metabolic process	IEP	Neighborhood
BP	GO:0046483	heterocycle metabolic process	IEP	Neighborhood
BP	GO:0090304	nucleic acid metabolic process	IEP	Neighborhood
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Neighborhood
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR006073	GTP_binding_domain	81	198

External Links

No external refs found!