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  5. AMTR_s00053p00186800

AMTR_s00053p00186800 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00053.136

Description : Lipid metabolism.glycerolipid synthesis.phosphatidic acid.NAD-dependent glycerol-3-phosphate dehydrogenase


Gene families : OG0002581 (Archaeplastida) Phylogenetic Tree(s): OG0002581_tree ,
OG_05_0002789 (LandPlants) Phylogenetic Tree(s): OG_05_0002789_tree ,
OG_06_0003285 (SeedPlants) Phylogenetic Tree(s): OG_06_0003285_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00053p00186800
Cluster HCCA: Cluster_177

Target Alias Description ECC score Gene Family Method Actions
Solyc01g088150.3.1 No alias NAD-dependent glycerol-3-phosphate dehydrogenase.... 0.04 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEA Interproscan
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA Interproscan
BP GO:0046168 glycerol-3-phosphate catabolic process IEA Interproscan
MF GO:0051287 NAD binding IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005674 transcription factor TFIIF complex IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Neighborhood
BP GO:0006855 drug transmembrane transport IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
MF GO:0015238 drug transmembrane transporter activity IEP Neighborhood
BP GO:0015893 drug transport IEP Neighborhood
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR011128 G3P_DH_NAD-dep_N 146 247
IPR006109 G3P_DH_NAD-dep_C 274 431
No external refs found!