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  5. Cre12.g528750

Cre12.g528750


Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL12 component


Gene families : OG0002167 (Archaeplastida) Phylogenetic Tree(s): OG0002167_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g528750
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00105p00048810 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.26 Archaeplastida
AMTR_s00148p00026900 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.15 Archaeplastida
AT2G37190 No alias Ribosomal protein L11 family protein 0.41 Archaeplastida
AT3G53430 No alias Ribosomal protein L11 family protein 0.24 Archaeplastida
AT5G60670 No alias Ribosomal protein L11 family protein 0.29 Archaeplastida
Cpa|evm.model.tig00001339.27 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.28 Archaeplastida
GSVIVT01016274001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 Archaeplastida
GSVIVT01025189001 No alias No description available 0.28 Archaeplastida
GSVIVT01025683001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.22 Archaeplastida
LOC_Os02g47140.1 No alias component RPL12 of LSU proteome component 0.24 Archaeplastida
LOC_Os04g50990.1 No alias component RPL12 of LSU proteome component 0.33 Archaeplastida
MA_10427147g0010 No alias component RPL12 of LSU proteome component 0.32 Archaeplastida
Mp3g02020.1 No alias component RPL12 of LSU proteome component 0.43 Archaeplastida
Pp3c15_14410V3.1 No alias Ribosomal protein L11 family protein 0.33 Archaeplastida
Pp3c16_2860V3.1 No alias Ribosomal protein L11 family protein 0.38 Archaeplastida
Pp3c27_660V3.1 No alias Ribosomal protein L11 family protein 0.32 Archaeplastida
Pp3c27_820V3.1 No alias Ribosomal protein L11 family protein 0.04 Archaeplastida
Pp3c6_19290V3.1 No alias Ribosomal protein L11 family protein 0.22 Archaeplastida
Pp3c9_15380V3.1 No alias Ribosomal protein L11 family protein 0.4 Archaeplastida
Smo227409 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.13 Archaeplastida
Solyc06g075180.1.1 No alias component RPL12 of LSU proteome component 0.23 Archaeplastida
Solyc11g065670.1.1 No alias component RPL12 of LSU proteome component 0.3 Archaeplastida
Solyc11g069440.1.1 No alias component RPL12 of LSU proteome component 0.35 Archaeplastida
Zm00001e007067_P001 No alias component RPL12 of LSU proteome component 0.14 Archaeplastida
Zm00001e008316_P001 No alias component RPL12 of LSU proteome component 0.15 Archaeplastida
Zm00001e023297_P001 No alias component RPL12 of LSU proteome component 0.2 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
CC GO:0005743 mitochondrial inner membrane IEP Neighborhood
CC GO:0005747 mitochondrial respiratory chain complex I IEP Neighborhood
CC GO:0005750 mitochondrial respiratory chain complex III IEP Neighborhood
BP GO:0006091 generation of precursor metabolites and energy IEP Neighborhood
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0019866 organelle inner membrane IEP Neighborhood
BP GO:0022900 electron transport chain IEP Neighborhood
BP GO:0022904 respiratory electron transport chain IEP Neighborhood
CC GO:0030964 NADH dehydrogenase complex IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
CC GO:0045271 respiratory chain complex I IEP Neighborhood
CC GO:0045275 respiratory chain complex III IEP Neighborhood
CC GO:0070069 cytochrome complex IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098800 inner mitochondrial membrane protein complex IEP Neighborhood
CC GO:0098803 respiratory chain complex IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR020784 Ribosomal_L11_N 10 70
IPR020783 Ribosomal_L11_C 75 144
No external refs found!