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  5. Cre12.g529400

Cre12.g529400


Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS27 component


Gene families : OG0001943 (Archaeplastida) Phylogenetic Tree(s): OG0001943_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g529400
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00194290 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.08 Archaeplastida
AT2G45710 No alias Zinc-binding ribosomal protein family protein 0.03 Archaeplastida
AT3G61110 ARS27A, RS27A ribosomal protein S27 0.12 Archaeplastida
AT5G47930 No alias Zinc-binding ribosomal protein family protein 0.12 Archaeplastida
Cpa|evm.model.tig00001299.2 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.11 Archaeplastida
GSVIVT01001113001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.19 Archaeplastida
GSVIVT01032964001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.1 Archaeplastida
LOC_Os04g27860.1 No alias component RPS27 of SSU proteome 0.03 Archaeplastida
LOC_Os04g32710.1 No alias component RPS27 of SSU proteome 0.05 Archaeplastida
MA_54625g0010 No alias component RPS27 of SSU proteome 0.08 Archaeplastida
MA_87055g0010 No alias component RPS27 of SSU proteome 0.02 Archaeplastida
Mp5g09510.1 No alias component RPS27 of SSU proteome 0.2 Archaeplastida
Pp3c18_2100V3.1 No alias ribosomal protein S27 0.04 Archaeplastida
Pp3c1_15840V3.1 No alias ribosomal protein S27 0.28 Archaeplastida
Pp3c21_21540V3.1 No alias ribosomal protein S27 0.05 Archaeplastida
Pp3c22_18310V3.1 No alias ribosomal protein S27 0.2 Archaeplastida
Pp3c2_20540V3.1 No alias ribosomal protein S27 0.15 Archaeplastida
Smo163947 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.11 Archaeplastida
Solyc01g008080.3.1 No alias component RPS27 of SSU proteome 0.04 Archaeplastida
Solyc01g008090.4.1 No alias component RPS27 of SSU proteome 0.02 Archaeplastida
Solyc06g068710.3.1 No alias component RPS27 of SSU proteome 0.02 Archaeplastida
Zm00001e012048_P001 No alias component RPS27 of SSU proteome 0.07 Archaeplastida
Zm00001e024704_P001 No alias component RPS27 of SSU proteome 0.08 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005622 intracellular IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Neighborhood
CC GO:0000123 histone acetyltransferase complex IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
CC GO:0005743 mitochondrial inner membrane IEP Neighborhood
CC GO:0005747 mitochondrial respiratory chain complex I IEP Neighborhood
CC GO:0005750 mitochondrial respiratory chain complex III IEP Neighborhood
BP GO:0006091 generation of precursor metabolites and energy IEP Neighborhood
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP Neighborhood
BP GO:0006473 protein acetylation IEP Neighborhood
BP GO:0006475 internal protein amino acid acetylation IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016573 histone acetylation IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0018393 internal peptidyl-lysine acetylation IEP Neighborhood
BP GO:0018394 peptidyl-lysine acetylation IEP Neighborhood
CC GO:0019866 organelle inner membrane IEP Neighborhood
BP GO:0022900 electron transport chain IEP Neighborhood
BP GO:0022904 respiratory electron transport chain IEP Neighborhood
CC GO:0030964 NADH dehydrogenase complex IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031248 protein acetyltransferase complex IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
BP GO:0043543 protein acylation IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
CC GO:0045271 respiratory chain complex I IEP Neighborhood
CC GO:0045275 respiratory chain complex III IEP Neighborhood
CC GO:0070069 cytochrome complex IEP Neighborhood
CC GO:0070469 respiratory chain IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098800 inner mitochondrial membrane protein complex IEP Neighborhood
CC GO:0098803 respiratory chain complex IEP Neighborhood
MF GO:1901567 fatty acid derivative binding IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
CC GO:1902493 acetyltransferase complex IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR000592 Ribosomal_S27e 30 84
No external refs found!