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  5. Cre12.g542450

Cre12.g542450


Description : Probable RNA helicase SDE3 OS=Arabidopsis thaliana


Gene families : OG0002518 (Archaeplastida) Phylogenetic Tree(s): OG0002518_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g542450
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AT1G05460 SDE3 P-loop containing nucleoside triphosphate hydrolases... 0.02 Archaeplastida
Gb_16211 No alias Probable RNA helicase SDE3 OS=Arabidopsis thaliana... 0.01 Archaeplastida
Gb_16212 No alias Probable RNA helicase SDE3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_16213 No alias Probable RNA helicase SDE3 OS=Arabidopsis thaliana... 0.01 Archaeplastida
Gb_16361 No alias Probable RNA helicase SDE3 OS=Arabidopsis thaliana... 0.01 Archaeplastida
Gb_18116 No alias Probable RNA helicase SDE3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_33934g0010 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!