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  5. Cre12.g549550

Cre12.g549550


Description : Cytoskeleton.microtubular network.alpha-beta-Tubulin heterodimer.beta-Tubulin component


Gene families : OG0000156 (Archaeplastida) Phylogenetic Tree(s): OG0000156_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g549550
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00255970 evm_27.TU.AmTr_v1... Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.02 Archaeplastida
AT5G44340 TUB4 tubulin beta chain 4 0.04 Archaeplastida
Cpa|evm.model.tig00001067.14 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.02 Archaeplastida
Cpa|evm.model.tig00001067.6 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.02 Archaeplastida
GSVIVT01019758001 No alias Tubulin beta-4 chain OS=Eleusine indica 0.02 Archaeplastida
GSVIVT01021707001 No alias Tubulin beta chain (Fragment) OS=Glycine max 0.03 Archaeplastida
LOC_Os01g18050.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Archaeplastida
LOC_Os03g45920.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Archaeplastida
LOC_Os05g34170.2 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Archaeplastida
LOC_Os06g46000.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Archaeplastida
MA_8976798g0010 No alias Tubulin beta-1 chain OS=Zea mays (sp|p18025|tbb1_maize : 97.8) 0.02 Archaeplastida
MA_9578301g0010 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.01 Archaeplastida
Pp3c21_17300V3.1 No alias tubulin beta chain 2 0.01 Archaeplastida
Pp3c5_20340V3.1 No alias tubulin beta chain 2 0.02 Archaeplastida
Pp3c8_2420V3.1 No alias tubulin beta chain 2 0.03 Archaeplastida
Smo138663 No alias Tubulin beta-1/beta-2 chain OS=Chlamydomonas reinhardtii 0.01 Archaeplastida
Smo23429 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.02 Archaeplastida
Zm00001e011926_P001 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Archaeplastida
Zm00001e019525_P002 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Archaeplastida
Zm00001e025464_P001 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Archaeplastida
Zm00001e028896_P004 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Archaeplastida
Zm00001e030351_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0004089 carbonate dehydratase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
CC GO:0005875 microtubule associated complex IEP Neighborhood
CC GO:0005929 cilium IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
CC GO:0030286 dynein complex IEP Neighborhood
CC GO:0031514 motile cilium IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0040011 locomotion IEP Neighborhood
CC GO:0042995 cell projection IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0048870 cell motility IEP Neighborhood
CC GO:0120025 plasma membrane bounded cell projection IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
InterPro domains Description Start Stop
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 261 382
IPR003008 Tubulin_FtsZ_GTPase 3 211
No external refs found!