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  5. Cre12.g561200

Cre12.g561200


Description : Vesicle trafficking.clathrin coated vesicle (CCV) machinery.TPLATE AP-2 co-adaptor complex.LOLITA component


Gene families : OG0005538 (Archaeplastida) Phylogenetic Tree(s): OG0005538_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g561200
Cluster HCCA: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01017313001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.02 Archaeplastida
MA_10428289g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_5639274g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp1g03810.1 No alias component LOLITA of TPLATE AP-2 co-adaptor complex 0.02 Archaeplastida
Pp3c18_11860V3.1 No alias SNARE-like superfamily protein 0.02 Archaeplastida
Solyc03g116600.3.1 No alias component LOLITA of TPLATE AP-2 co-adaptor complex 0.04 Archaeplastida
Solyc06g068080.4.1 No alias component LOLITA of TPLATE AP-2 co-adaptor complex 0.05 Archaeplastida
Zm00001e006410_P001 No alias component LOLITA of TPLATE AP-2 co-adaptor complex 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP Neighborhood
CC GO:0000445 THO complex part of transcription export complex IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003954 NADH dehydrogenase activity IEP Neighborhood
MF GO:0004298 threonine-type endopeptidase activity IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Neighborhood
BP GO:0008654 phospholipid biosynthetic process IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
CC GO:0030008 TRAPP complex IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
MF GO:0070003 threonine-type peptidase activity IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
InterPro domains Description Start Stop
IPR022775 AP_mu_sigma_su 9 142
No external refs found!