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  5. Cre13.g562850

Cre13.g562850


Description : Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.Psb29 protein


Gene families : OG0007097 (Archaeplastida) Phylogenetic Tree(s): OG0007097_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre13.g562850
Cluster HCCA: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
AT2G20890 PSB29, THF1 photosystem II reaction center PSB29 protein 0.04 Archaeplastida
GSVIVT01029990001 No alias Photosynthesis.photophosphorylation.photosystem... 0.02 Archaeplastida
MA_10426766g0010 No alias Psb29 protein involved in PS-II assembly 0.02 Archaeplastida
Mp5g23000.1 No alias Psb29 protein involved in PS-II assembly 0.02 Archaeplastida
Pp3c21_14540V3.1 No alias photosystem II reaction center PSB29 protein 0.04 Archaeplastida
Solyc07g054820.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e035236_P001 No alias Psb29 protein involved in PS-II assembly 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0010207 photosystem II assembly IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Neighborhood
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0004602 glutathione peroxidase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006576 cellular biogenic amine metabolic process IEP Neighborhood
BP GO:0006595 polyamine metabolic process IEP Neighborhood
BP GO:0006596 polyamine biosynthetic process IEP Neighborhood
BP GO:0006597 spermine biosynthetic process IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0008215 spermine metabolic process IEP Neighborhood
BP GO:0008216 spermidine metabolic process IEP Neighborhood
BP GO:0008295 spermidine biosynthetic process IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
MF GO:0008565 protein transporter activity IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
BP GO:0009309 amine biosynthetic process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0032977 membrane insertase activity IEP Neighborhood
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Neighborhood
BP GO:0044106 cellular amine metabolic process IEP Neighborhood
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0097164 ammonium ion metabolic process IEP Neighborhood
MF GO:0098809 nitrite reductase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR017499 Thf1 44 246
No external refs found!