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  5. Cre13.g568650

Cre13.g568650


Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS3a component


Gene families : OG0001983 (Archaeplastida) Phylogenetic Tree(s): OG0001983_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre13.g568650
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00271660 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.14 Archaeplastida
AMTR_s00026p00042160 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 Archaeplastida
AT3G04840 No alias Ribosomal protein S3Ae 0.24 Archaeplastida
AT4G34670 No alias Ribosomal protein S3Ae 0.19 Archaeplastida
Cpa|evm.model.tig00020710.39 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.22 Archaeplastida
GSVIVT01018024001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.12 Archaeplastida
GSVIVT01021836001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.35 Archaeplastida
Gb_02289 No alias component RPS3a of SSU proteome 0.21 Archaeplastida
LOC_Os02g18550.1 No alias component RPS3a of SSU proteome 0.04 Archaeplastida
LOC_Os03g10340.1 No alias component RPS3a of SSU proteome 0.09 Archaeplastida
LOC_Os12g21798.1 No alias component RPS3a of SSU proteome 0.09 Archaeplastida
MA_124901g0010 No alias component RPS3a of SSU proteome 0.16 Archaeplastida
MA_31004g0010 No alias component RPS3a of SSU proteome 0.19 Archaeplastida
Mp6g02810.1 No alias component RPS3a of SSU proteome 0.3 Archaeplastida
Pp3c11_17260V3.1 No alias Ribosomal protein S3Ae 0.18 Archaeplastida
Pp3c12_18590V3.1 No alias Ribosomal protein S3Ae 0.07 Archaeplastida
Pp3c18_2090V3.1 No alias Ribosomal protein S3Ae 0.31 Archaeplastida
Pp3c21_21510V3.1 No alias Ribosomal protein S3Ae 0.24 Archaeplastida
Pp3c22_18300V3.1 No alias Ribosomal protein S3Ae 0.04 Archaeplastida
Pp3c4_14160V3.1 No alias Ribosomal protein S3Ae 0.13 Archaeplastida
Smo160008 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 Archaeplastida
Smo271906 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 Archaeplastida
Smo271907 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 Archaeplastida
Solyc03g097900.3.1 No alias component RPS3a of SSU proteome 0.15 Archaeplastida
Solyc06g072490.3.1 No alias component RPS3a of SSU proteome 0.18 Archaeplastida
Solyc09g082520.3.1 No alias component RPS3a of SSU proteome 0.08 Archaeplastida
Zm00001e000767_P001 No alias No annotation 0.08 Archaeplastida
Zm00001e038777_P001 No alias component RPS3a of SSU proteome 0.11 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005622 intracellular IEP Neighborhood
CC GO:0005743 mitochondrial inner membrane IEP Neighborhood
CC GO:0005750 mitochondrial respiratory chain complex III IEP Neighborhood
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP Neighborhood
CC GO:0019866 organelle inner membrane IEP Neighborhood
BP GO:0022900 electron transport chain IEP Neighborhood
BP GO:0022904 respiratory electron transport chain IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
CC GO:0045275 respiratory chain complex III IEP Neighborhood
CC GO:0070069 cytochrome complex IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098800 inner mitochondrial membrane protein complex IEP Neighborhood
CC GO:0098803 respiratory chain complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001593 Ribosomal_S3Ae 15 221
No external refs found!