Cre13.g571050

Description : High mobility group B protein 9 OS=Arabidopsis thaliana

Gene families : OG0000729 (Archaeplastida) Phylogenetic Tree(s): OG0000729_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre13.g571050
Cluster	HCCA: Cluster_156

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01014843001	No alias	High mobility group B protein 10 OS=Arabidopsis thaliana	0.02	Archaeplastida
MA_10429670g0010	No alias	no hits & (original description: none)	0.01	Archaeplastida
Solyc09g091960.3.1	No alias	High mobility group B protein 15 OS=Arabidopsis thaliana...	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003684	damaged DNA binding	IEP	Neighborhood
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	Neighborhood
BP	GO:0006813	potassium ion transport	IEP	Neighborhood
MF	GO:0019899	enzyme binding	IEP	Neighborhood
BP	GO:0019941	modification-dependent protein catabolic process	IEP	Neighborhood
MF	GO:0031625	ubiquitin protein ligase binding	IEP	Neighborhood
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	Neighborhood
MF	GO:0044389	ubiquitin-like protein ligase binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR009071	HMG_box_dom	1573	1634
IPR001606	ARID_dom	46	130

External Links

No external refs found!