Cre13.g573650

Description : RNA processing.RNA splicing.spliceosome-associated non-snRNP factors.SCL28/30/33 splicing factor

Gene families : OG0001329 (Archaeplastida) Phylogenetic Tree(s): OG0001329_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre13.g573650
Cluster	HCCA: Cluster_86

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00197p00027080	evm_27.TU.AmTr_v1...	RNA processing.RNA splicing.spliceosome-associated...	0.02	Archaeplastida
LOC_Os03g24890.1	No alias	SCL28/30/33 RNA splicing factor	0.01	Archaeplastida
LOC_Os12g38430.1	No alias	SCL28/30/33 RNA splicing factor	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0009507	chloroplast	IEP	Neighborhood
CC	GO:0009536	plastid	IEP	Neighborhood
MF	GO:0046422	violaxanthin de-epoxidase activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	22	91

External Links

No external refs found!