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  5. Cre13.g587500

Cre13.g587500


Description : Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Oryza sativa subsp. japonica


Gene families : OG0001144 (Archaeplastida) Phylogenetic Tree(s): OG0001144_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre13.g587500
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000655.47 No alias No description available 0.05 Archaeplastida
Cpa|evm.model.tig00001302.9 No alias No description available 0.04 Archaeplastida
Cpa|evm.model.tig00020734.51 No alias 15-cis-phytoene desaturase, chloroplastic/chromoplastic... 0.07 Archaeplastida
Gb_06069 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g47290.2 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_10428599g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_135340g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_580945g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_705500g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
Mp1g18160.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Pp3c3_37260V3.1 No alias phytoene desaturase 3 0.08 Archaeplastida
Smo74261 No alias 15-cis-phytoene desaturase, chloroplastic/chromoplastic... 0.01 Archaeplastida
Zm00001e007260_P002 No alias no hits & (original description: none) 0.08 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0004602 glutathione peroxidase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP Neighborhood
BP GO:0010207 photosystem II assembly IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Neighborhood
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP Neighborhood
MF GO:0098809 nitrite reductase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR002937 Amino_oxidase 96 551
No external refs found!