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  5. AMTR_s00055p00034230

AMTR_s00055p00034230 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00055.9

Description : Solute transport.carrier-mediated transport.APC superfamily.AAAP family.amino acid transporter (AAP-type)


Gene families : OG0000240 (Archaeplastida) Phylogenetic Tree(s): OG0000240_tree ,
OG_05_0015230 (LandPlants) Phylogenetic Tree(s): OG_05_0015230_tree ,
OG_06_0013682 (SeedPlants) Phylogenetic Tree(s): OG_06_0013682_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00055p00034230
Cluster HCCA: Cluster_369

Target Alias Description ECC score Gene Family Method Actions
MA_10058543g0010 No alias amino acid transporter (AAP) 0.25 Archaeplastida
MA_123993g0010 No alias amino acid transporter (AAP) 0.17 Archaeplastida
MA_43770g0010 No alias amino acid transporter (AAP) 0.12 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 47 305
No external refs found!