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No description available
Gene families : OG0004740 (Archaeplastida) Phylogenetic Tree(s): OG0004740_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre13.g606350 | |
| Cluster | HCCA: Cluster_95 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00100p00114870 | evm_27.TU.AmTr_v1... | No description available | 0.02 | Archaeplastida | |
| AT4G00800 | No alias | transducin family protein / WD-40 repeat family protein | 0.05 | Archaeplastida | |
| Gb_27586 | No alias | CORVET-specific component VPS8 of HOPS/CORVET membrane... | 0.06 | Archaeplastida | |
| LOC_Os02g03220.1 | No alias | CORVET-specific component VPS8 of HOPS/CORVET membrane... | 0.02 | Archaeplastida | |
| MA_10428293g0010 | No alias | CORVET-specific component VPS8 of HOPS/CORVET membrane... | 0.03 | Archaeplastida | |
| MA_10432728g0020 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| MA_177428g0010 | No alias | no hits & (original description: none) | 0.01 | Archaeplastida | |
| MA_37485g0010 | No alias | no hits & (original description: none) | 0.05 | Archaeplastida | |
| MA_9408238g0010 | No alias | no hits & (original description: none) | 0.01 | Archaeplastida | |
| Mp8g08230.1 | No alias | CORVET-specific component VPS8 of HOPS/CORVET membrane... | 0.06 | Archaeplastida | |
| Pp3c17_2710V3.1 | No alias | transducin family protein / WD-40 repeat family protein | 0.06 | Archaeplastida | |
| Pp3c7_20800V3.1 | No alias | transducin family protein / WD-40 repeat family protein | 0.05 | Archaeplastida | |
| Solyc05g044610.3.1 | No alias | CORVET-specific component VPS8 of HOPS/CORVET membrane... | 0.04 | Archaeplastida | |
| Zm00001e013515_P001 | No alias | CORVET-specific component VPS8 of HOPS/CORVET membrane... | 0.05 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | Neighborhood |
| BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | Neighborhood |
| MF | GO:0004518 | nuclease activity | IEP | Neighborhood |
| MF | GO:0004521 | endoribonuclease activity | IEP | Neighborhood |
| MF | GO:0004525 | ribonuclease III activity | IEP | Neighborhood |
| MF | GO:0004674 | protein serine/threonine kinase activity | IEP | Neighborhood |
| MF | GO:0005096 | GTPase activator activity | IEP | Neighborhood |
| MF | GO:0005216 | ion channel activity | IEP | Neighborhood |
| MF | GO:0005244 | voltage-gated ion channel activity | IEP | Neighborhood |
| MF | GO:0005247 | voltage-gated chloride channel activity | IEP | Neighborhood |
| MF | GO:0005253 | anion channel activity | IEP | Neighborhood |
| MF | GO:0005254 | chloride channel activity | IEP | Neighborhood |
| BP | GO:0006401 | RNA catabolic process | IEP | Neighborhood |
| BP | GO:0006402 | mRNA catabolic process | IEP | Neighborhood |
| BP | GO:0006821 | chloride transport | IEP | Neighborhood |
| MF | GO:0008308 | voltage-gated anion channel activity | IEP | Neighborhood |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | Neighborhood |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0010629 | negative regulation of gene expression | IEP | Neighborhood |
| MF | GO:0015075 | ion transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015108 | chloride transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015267 | channel activity | IEP | Neighborhood |
| MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0016197 | endosomal transport | IEP | Neighborhood |
| BP | GO:0016482 | cytosolic transport | IEP | Neighborhood |
| MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | Neighborhood |
| MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Neighborhood |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0022832 | voltage-gated channel activity | IEP | Neighborhood |
| MF | GO:0022838 | substrate-specific channel activity | IEP | Neighborhood |
| MF | GO:0030695 | GTPase regulator activity | IEP | Neighborhood |
| MF | GO:0032296 | double-stranded RNA-specific ribonuclease activity | IEP | Neighborhood |
| BP | GO:0042147 | retrograde transport, endosome to Golgi | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR025941 | Vps8_central_dom | 4102 | 4342 |
| No external refs found! |