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  5. Cre14.g615500

Cre14.g615500


Description : RNA processing.RNA modification.tRNA N6-threonylcarbamoylation.mitochondrial tRNA threonylcarbamoyl transferase


Gene families : OG0005627 (Archaeplastida) Phylogenetic Tree(s): OG0005627_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre14.g615500
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01027664001 No alias RNA processing.RNA modification.tRNA... 0.04 Archaeplastida
LOC_Os12g29990.1 No alias mitochondrial tRNA threonylcarbamoyl transferase 0.03 Archaeplastida
Mp1g12690.1 No alias mitochondrial tRNA threonylcarbamoyl transferase 0.03 Archaeplastida
Pp3c15_10750V3.1 No alias glycoprotease 1 0.02 Archaeplastida
Solyc05g050940.4.1 No alias mitochondrial tRNA threonylcarbamoyl transferase 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
MF GO:0009982 pseudouridine synthase activity IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000905 Gcp-like_dom 161 271
IPR000905 Gcp-like_dom 405 606
No external refs found!