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  5. Cre14.g627800

Cre14.g627800


Description : Acyl-CoA-binding domain-containing protein 4 OS=Oryza sativa subsp. japonica


Gene families : OG0002782 (Archaeplastida) Phylogenetic Tree(s): OG0002782_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre14.g627800
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
MA_10426181g0010 No alias Acyl-CoA-binding domain-containing protein 2... 0.02 Archaeplastida
MA_10428659g0010 No alias Acyl-CoA-binding domain-containing protein 2... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Neighborhood
BP GO:0000350 generation of catalytic spliceosome for second transesterification step IEP Neighborhood
CC GO:0000439 transcription factor TFIIH core complex IEP Neighborhood
CC GO:0001401 mitochondrial sorting and assembly machinery complex IEP Neighborhood
BP GO:0001510 RNA methylation IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
BP GO:0006289 nucleotide-excision repair IEP Neighborhood
BP GO:0006354 DNA-templated transcription, elongation IEP Neighborhood
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
CC GO:0008023 transcription elongation factor complex IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016556 mRNA modification IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
CC GO:0016593 Cdc73/Paf1 complex IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
BP GO:0022618 ribonucleoprotein complex assembly IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0080009 mRNA methylation IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098799 outer mitochondrial membrane protein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR020683 Ankyrin_rpt-contain_dom 148 240
IPR000582 Acyl-CoA-binding_protein 17 97
No external refs found!