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  5. Cre16.g649900

Cre16.g649900


Description : Chromatin organisation.histones.H3-type histone


Gene families : OG0000119 (Archaeplastida) Phylogenetic Tree(s): OG0000119_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre16.g649900
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
Cre06.g264650 No alias Chromatin organisation.histones.H3-type histone 0.01 Archaeplastida
Cre17.g708150 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
Cre17.g709050 No alias Chromatin organisation.histones.H3-type histone 0.01 Archaeplastida
Gb_08475 No alias histone (H3) 0.01 Archaeplastida
Gb_15586 No alias histone (H3) 0.01 Archaeplastida
Gb_29026 No alias histone (H3) 0.02 Archaeplastida
Gb_29027 No alias histone (H3) 0.02 Archaeplastida
Gb_30564 No alias histone (H3) 0.01 Archaeplastida
Gb_36661 No alias histone (H3) 0.01 Archaeplastida
Gb_40804 No alias histone (H3) 0.01 Archaeplastida
LOC_Os02g25910.1 No alias histone (H3) 0.01 Archaeplastida
LOC_Os03g27310.2 No alias histone (H3) 0.02 Archaeplastida
LOC_Os05g36280.1 No alias histone (H3) 0.01 Archaeplastida
MA_113838g0010 No alias histone (H3) 0.01 Archaeplastida
MA_210354g0010 No alias histone (H3) 0.01 Archaeplastida
MA_24261g0010 No alias histone (H3) 0.02 Archaeplastida
MA_356208g0010 No alias histone (H3) 0.01 Archaeplastida
MA_561217g0010 No alias histone (H3) 0.01 Archaeplastida
MA_871602g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
Pp3c23_15100V3.1 No alias Histone superfamily protein 0.01 Archaeplastida
Pp3c24_11100V3.1 No alias Histone superfamily protein 0.01 Archaeplastida
Pp3c24_13230V3.1 No alias Histone superfamily protein 0.01 Archaeplastida
Smo103546 No alias Chromatin organisation.histones.H3-type histone 0.01 Archaeplastida
Solyc01g074000.3.1 No alias histone (H3) 0.02 Archaeplastida
Solyc01g079110.4.1 No alias histone (H3) 0.02 Archaeplastida
Solyc01g080600.4.1 No alias histone (H3) 0.02 Archaeplastida
Solyc01g086820.4.1 No alias histone (H3) 0.02 Archaeplastida
Solyc02g077480.1.1 No alias histone (H3) 0.02 Archaeplastida
Solyc10g008910.1.1 No alias histone (H3) 0.02 Archaeplastida
Solyc12g056540.1.1 No alias histone (H3) 0.02 Archaeplastida
Zm00001e008155_P001 No alias histone (H3) 0.01 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0005200 structural constituent of cytoskeleton IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
MF GO:0008198 ferrous iron binding IEP Neighborhood
BP GO:0008202 steroid metabolic process IEP Neighborhood
BP GO:0016125 sterol metabolic process IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016863 intramolecular oxidoreductase activity, transposing C=C bonds IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
MF GO:0047750 cholestenol delta-isomerase activity IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
BP GO:1901615 organic hydroxy compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 1 131
No external refs found!