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  5. AMTR_s00055p00188210

AMTR_s00055p00188210 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00055.117

Description : Protein ENHANCED DOWNY MILDEW 2 OS=Arabidopsis thaliana


Gene families : OG0000993 (Archaeplastida) Phylogenetic Tree(s): OG0000993_tree ,
OG_05_0012855 (LandPlants) Phylogenetic Tree(s): OG_05_0012855_tree ,
OG_06_0012868 (SeedPlants) Phylogenetic Tree(s): OG_06_0012868_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00055p00188210
Cluster HCCA: Cluster_231

Target Alias Description ECC score Gene Family Method Actions
AT5G55390 EDM2 ENHANCED DOWNY MILDEW 2 0.03 Archaeplastida
Gb_35350 No alias chromatin-associated epigenetic factor 0.02 Archaeplastida
LOC_Os01g32710.1 No alias Protein ENHANCED DOWNY MILDEW 2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_10437053g0010 No alias Protein ENHANCED DOWNY MILDEW 2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_9621602g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c17_12870V3.1 No alias ENHANCED DOWNY MILDEW 2 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005643 nuclear pore IEP Neighborhood
CC GO:0005856 cytoskeleton IEP Neighborhood
BP GO:0006904 vesicle docking involved in exocytosis IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0022406 membrane docking IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0048278 vesicle docking IEP Neighborhood
BP GO:0051640 organelle localization IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
BP GO:0140029 exocytic process IEP Neighborhood
BP GO:0140056 organelle localization by membrane tethering IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR022702 Cytosine_MeTrfase1_RFD 11 137
No external refs found!