1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT1G51530

AT1G51530


Description : RNA-binding (RRM/RBD/RNP motifs) family protein


Gene families : OG0000743 (Archaeplastida) Phylogenetic Tree(s): OG0000743_tree ,
OG_05_0017387 (LandPlants) Phylogenetic Tree(s): OG_05_0017387_tree ,
OG_06_0016916 (SeedPlants) Phylogenetic Tree(s): OG_06_0016916_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G51530
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
AT2G05160 No alias CCCH-type zinc fingerfamily protein with RNA-binding domain 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISS Interproscan
CC GO:0005575 cellular_component ND Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004407 histone deacetylase activity IEP Neighborhood
BP GO:0010048 vernalization response IEP Neighborhood
BP GO:0010315 auxin efflux IEP Neighborhood
BP GO:0010540 basipetal auxin transport IEP Neighborhood
BP GO:0010541 acropetal auxin transport IEP Neighborhood
BP GO:0010928 regulation of auxin mediated signaling pathway IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors IEP Neighborhood
MF GO:0019213 deacetylase activity IEP Neighborhood
MF GO:0033558 protein deacetylase activity IEP Neighborhood
BP GO:0043473 pigmentation IEP Neighborhood
BP GO:0043476 pigment accumulation IEP Neighborhood
BP GO:0043478 pigment accumulation in response to UV light IEP Neighborhood
BP GO:0043479 pigment accumulation in tissues in response to UV light IEP Neighborhood
BP GO:0043480 pigment accumulation in tissues IEP Neighborhood
BP GO:0043481 anthocyanin accumulation in tissues in response to UV light IEP Neighborhood
BP GO:0048437 floral organ development IEP Neighborhood
BP GO:0048440 carpel development IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!