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  5. Cre16.g661450

Cre16.g661450


Description : Cell cycle.mitosis and meiosis.chromosome segregation.centromere assembly and maintenance.CENH3 histone H3 variant


Gene families : OG0000119 (Archaeplastida) Phylogenetic Tree(s): OG0000119_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre16.g661450
Cluster HCCA: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00240080 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
AMTR_s00018p00168040 No alias Chromatin organisation.histones.H3-type histone 0.04 Archaeplastida
AMTR_s00030p00044250 No alias Chromatin organisation.histones.H3-type histone 0.03 Archaeplastida
AT1G09200 No alias Histone superfamily protein 0.04 Archaeplastida
AT3G27360 No alias Histone superfamily protein 0.07 Archaeplastida
AT4G40030 No alias Histone superfamily protein 0.02 Archaeplastida
AT4G40040 No alias Histone superfamily protein 0.02 Archaeplastida
AT5G10390 No alias Histone superfamily protein 0.07 Archaeplastida
AT5G10400 No alias Histone superfamily protein 0.04 Archaeplastida
AT5G65360 No alias Histone superfamily protein 0.04 Archaeplastida
GSVIVT01025316001 No alias Histone H3.2 OS=Pisum sativum 0.05 Archaeplastida
GSVIVT01025318001 No alias Histone H3.2 OS=Pisum sativum 0.07 Archaeplastida
GSVIVT01026582001 No alias Histone H3.2 OS=Pisum sativum 0.04 Archaeplastida
GSVIVT01027073001 No alias Cell cycle.mitosis and meiosis.chromosome... 0.05 Archaeplastida
GSVIVT01032047001 No alias Histone H3 OS=Volvox carteri 0.07 Archaeplastida
GSVIVT01034510001 No alias Histone H3.2 OS=Pisum sativum 0.02 Archaeplastida
Gb_27618 No alias histone (H3) 0.05 Archaeplastida
Gb_29027 No alias histone (H3) 0.04 Archaeplastida
Gb_36661 No alias histone (H3) 0.02 Archaeplastida
LOC_Os01g64640.1 No alias histone (H3) 0.06 Archaeplastida
LOC_Os04g34240.1 No alias histone (H3) 0.03 Archaeplastida
LOC_Os05g36280.1 No alias histone (H3) 0.09 Archaeplastida
LOC_Os05g41080.1 No alias histone H3 variant (CENH3) 0.06 Archaeplastida
LOC_Os06g06510.1 No alias histone (H3) 0.05 Archaeplastida
LOC_Os11g05730.1 No alias histone (H3) 0.05 Archaeplastida
MA_350032g0010 No alias histone (H3) 0.02 Archaeplastida
Mp3g07730.1 No alias histone (H3) 0.02 Archaeplastida
Mp3g09090.1 No alias histone (H3) 0.04 Archaeplastida
Mp7g10700.1 No alias histone (H3) 0.01 Archaeplastida
Mp7g16200.1 No alias histone (H3) 0.02 Archaeplastida
Pp3c1_20640V3.1 No alias Histone superfamily protein 0.02 Archaeplastida
Pp3c1_20670V3.1 No alias Histone superfamily protein 0.02 Archaeplastida
Pp3c24_11100V3.1 No alias Histone superfamily protein 0.02 Archaeplastida
Pp3c3_37020V3.1 No alias Histone superfamily protein 0.02 Archaeplastida
Pp3c8_2810V3.1 No alias Histone superfamily protein 0.02 Archaeplastida
Solyc01g074000.3.1 No alias histone (H3) 0.06 Archaeplastida
Solyc01g079110.4.1 No alias histone (H3) 0.06 Archaeplastida
Solyc01g080600.4.1 No alias histone (H3) 0.06 Archaeplastida
Solyc01g086820.4.1 No alias histone (H3) 0.07 Archaeplastida
Solyc01g095650.4.1 No alias histone H3 variant (CENH3) 0.01 Archaeplastida
Solyc02g077480.1.1 No alias histone (H3) 0.07 Archaeplastida
Solyc05g051500.4.1 No alias histone (H3) 0.02 Archaeplastida
Zm00001e001885_P003 No alias histone (H3) 0.05 Archaeplastida
Zm00001e007951_P001 No alias histone (H3) 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Neighborhood
CC GO:0000940 condensed chromosome outer kinetochore IEP Neighborhood
CC GO:0005815 microtubule organizing center IEP Neighborhood
CC GO:0005874 microtubule IEP Neighborhood
CC GO:0005876 spindle microtubule IEP Neighborhood
BP GO:0006275 regulation of DNA replication IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0007059 chromosome segregation IEP Neighborhood
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Neighborhood
MF GO:0019207 kinase regulator activity IEP Neighborhood
MF GO:0019887 protein kinase regulator activity IEP Neighborhood
BP GO:0034453 microtubule anchoring IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
BP GO:0051052 regulation of DNA metabolic process IEP Neighborhood
BP GO:0051301 cell division IEP Neighborhood
CC GO:0099080 supramolecular complex IEP Neighborhood
CC GO:0099081 supramolecular polymer IEP Neighborhood
CC GO:0099512 supramolecular fiber IEP Neighborhood
CC GO:0099513 polymeric cytoskeletal fiber IEP Neighborhood
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 27 147
No external refs found!