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  5. AMTR_s00055p00202230

AMTR_s00055p00202230 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00055.142

Description : Alpha-N-acetylglucosaminidase OS=Arabidopsis thaliana


Gene families : OG0005985 (Archaeplastida) Phylogenetic Tree(s): OG0005985_tree ,
OG_05_0004987 (LandPlants) Phylogenetic Tree(s): OG_05_0004987_tree ,
OG_06_0004559 (SeedPlants) Phylogenetic Tree(s): OG_06_0004559_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00055p00202230
Cluster HCCA: Cluster_184

Target Alias Description ECC score Gene Family Method Actions
Pp3c17_12040V3.1 No alias alpha-N-acetylglucosaminidase family / NAGLU family 0.02 Archaeplastida
Zm00001e006726_P001 No alias Alpha-N-acetylglucosaminidase OS=Arabidopsis thaliana... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Neighborhood
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0005351 carbohydrate:proton symporter activity IEP Neighborhood
MF GO:0005402 carbohydrate:cation symporter activity IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
BP GO:0008643 carbohydrate transport IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0015144 carbohydrate transmembrane transporter activity IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015293 symporter activity IEP Neighborhood
MF GO:0015294 solute:cation symporter activity IEP Neighborhood
MF GO:0015295 solute:proton symporter activity IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
InterPro domains Description Start Stop
IPR024732 NAGLU_C 422 721
IPR024733 NAGLU_tim-barrel 79 416
IPR024240 NAGLU_N 6 63
No external refs found!