1. Home
  2. Species
  3. Chlamydomonas reinhardtii
  4. Sequence
  5. Cre16.g665800

Cre16.g665800


Description : Probable starch synthase 4, chloroplastic/amyloplastic OS=Arabidopsis thaliana


Gene families : OG0000161 (Archaeplastida) Phylogenetic Tree(s): OG0000161_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre16.g665800
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00214840 evm_27.TU.AmTr_v1... Probable starch synthase 4, chloroplastic/amyloplastic... 0.02 Archaeplastida
AMTR_s00100p00051890 evm_27.TU.AmTr_v1... Carbohydrate metabolism.starch... 0.01 Archaeplastida
AMTR_s00189p00041140 evm_27.TU.AmTr_v1... Carbohydrate metabolism.starch... 0.02 Archaeplastida
AT1G11720 ATSS3, SS3 starch synthase 3 0.04 Archaeplastida
AT5G24300 SSI1, ATSS1, SSI Glycogen/starch synthases, ADP-glucose type 0.02 Archaeplastida
GSVIVT01003706001 No alias Probable starch synthase 4, chloroplastic/amyloplastic... 0.02 Archaeplastida
GSVIVT01012723001 No alias Carbohydrate metabolism.starch... 0.02 Archaeplastida
GSVIVT01019680001 No alias Carbohydrate metabolism.starch... 0.02 Archaeplastida
Gb_26227 No alias granule-bound starch (amylose) synthase 0.02 Archaeplastida
LOC_Os02g51070.1 No alias starch synthase (SSII) 0.02 Archaeplastida
LOC_Os04g53310.1 No alias starch synthase (SSIII) 0.02 Archaeplastida
LOC_Os08g09230.1 No alias starch synthase (SSIII) 0.02 Archaeplastida
MA_10437241g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_482181g0010 No alias Soluble starch synthase 1, chloroplastic/amyloplastic... 0.04 Archaeplastida
Mp2g08030.1 No alias Probable starch synthase 4, chloroplastic/amyloplastic... 0.03 Archaeplastida
Pp3c18_20850V3.1 No alias UDP-Glycosyltransferase superfamily protein 0.03 Archaeplastida
Solyc02g080570.3.1 No alias starch synthase (SSIII) 0.05 Archaeplastida
Zm00001e012782_P002 No alias starch synthase (SSII) 0.02 Archaeplastida
Zm00001e023903_P001 No alias starch synthase (SSII) 0.05 Archaeplastida
Zm00001e030868_P001 No alias starch synthase (SSII) 0.02 Archaeplastida
Zm00001e039962_P001 No alias starch synthase (SSIII) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003714 transcription corepressor activity IEP Neighborhood
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006817 phosphate ion transport IEP Neighborhood
MF GO:0008199 ferric iron binding IEP Neighborhood
MF GO:0008519 ammonium transmembrane transporter activity IEP Neighborhood
BP GO:0015696 ammonium transport IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
BP GO:0030163 protein catabolic process IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
MF GO:2001070 starch binding IEP Neighborhood
InterPro domains Description Start Stop
IPR013534 Starch_synth_cat_dom 149 392
IPR001296 Glyco_trans_1 459 616
No external refs found!