1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00056p00031380

AMTR_s00056p00031380 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00056.17

Description : Carotenoid 9,10(9,10)-cleavage dioxygenase OS=Crocus sativus


Gene families : OG0006470 (Archaeplastida) Phylogenetic Tree(s): OG0006470_tree ,
OG_05_0005140 (LandPlants) Phylogenetic Tree(s): OG_05_0005140_tree ,
OG_06_0003942 (SeedPlants) Phylogenetic Tree(s): OG_06_0003942_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00056p00031380
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
LOC_Os08g28410.1 No alias Carotenoid 9,10(9,10)-cleavage dioxygenase 1 OS=Pisum... 0.04 Archaeplastida
LOC_Os09g15240.1 No alias Carotenoid 9,10(9,10)-cleavage dioxygenase OS=Crocus... 0.02 Archaeplastida
Zm00001e033803_P002 No alias Carotenoid 9,10(9,10)-cleavage dioxygenase OS=Crocus... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 11 439
No external refs found!