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  5. AMTR_s00056p00032600

AMTR_s00056p00032600 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00056.18

Description : Carotenoid 9,10(9,10)-cleavage dioxygenase OS=Crocus sativus


Gene families : OG0006470 (Archaeplastida) Phylogenetic Tree(s): OG0006470_tree ,
OG_05_0005140 (LandPlants) Phylogenetic Tree(s): OG_05_0005140_tree ,
OG_06_0003942 (SeedPlants) Phylogenetic Tree(s): OG_06_0003942_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00056p00032600
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
LOC_Os08g28240.1 No alias Carotenoid 9,10(9,10)-cleavage dioxygenase 1 OS=Pisum... 0.02 Archaeplastida
LOC_Os09g15240.1 No alias Carotenoid 9,10(9,10)-cleavage dioxygenase OS=Crocus... 0.07 Archaeplastida
Zm00001e033803_P002 No alias Carotenoid 9,10(9,10)-cleavage dioxygenase OS=Crocus... 0.04 Archaeplastida
Zm00001e036424_P001 No alias Carotenoid 9,10(9,10)-cleavage dioxygenase OS=Crocus... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 29 391
No external refs found!