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  5. Cre16.g689650

Cre16.g689650


Description : Vesicle trafficking.autophagosome formation.ATG8/ATG12 conjugation system.ATG8 ubiquitin-fold protein


Gene families : OG0000927 (Archaeplastida) Phylogenetic Tree(s): OG0000927_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre16.g689650
Cluster HCCA: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
AT1G62040 ATG8C Ubiquitin-like superfamily protein 0.02 Archaeplastida
GSVIVT01030430001 No alias Vesicle trafficking.autophagosome formation.ATG8/ATG12... 0.03 Archaeplastida
GSVIVT01037666001 No alias Vesicle trafficking.autophagosome formation.ATG8/ATG12... 0.02 Archaeplastida
Gb_08297 No alias ATG8 autophagosome ubiquitin-fold protein 0.01 Archaeplastida
Gb_21524 No alias ATG8 autophagosome ubiquitin-fold protein 0.03 Archaeplastida
LOC_Os07g32800.2 No alias ATG8 autophagosome ubiquitin-fold protein 0.02 Archaeplastida
MA_6581216g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c1_32170V3.1 No alias Ubiquitin-like superfamily protein 0.03 Archaeplastida
Solyc07g064680.3.1 No alias ATG8 autophagosome ubiquitin-fold protein 0.02 Archaeplastida
Solyc10g006270.4.1 No alias No annotation 0.02 Archaeplastida
Zm00001e006887_P001 No alias ATG8 autophagosome ubiquitin-fold protein 0.05 Archaeplastida
Zm00001e010463_P001 No alias ATG8 autophagosome ubiquitin-fold protein 0.05 Archaeplastida
Zm00001e039966_P001 No alias ATG8 autophagosome ubiquitin-fold protein 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000045 autophagosome assembly IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005789 endoplasmic reticulum membrane IEP Neighborhood
BP GO:0007033 vacuole organization IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
BP GO:0070925 organelle assembly IEP Neighborhood
BP GO:1905037 autophagosome organization IEP Neighborhood
InterPro domains Description Start Stop
IPR004241 Atg8-like 17 120
No external refs found!