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  5. Cre17.g696400

Cre17.g696400


Description : Protein degradation.peptidase families.serine-type peptidase activities.chloroplast Clp-type protease complex.ClpS adaptor component


Gene families : OG0005375 (Archaeplastida) Phylogenetic Tree(s): OG0005375_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre17.g696400
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
LOC_Os08g33540.1 No alias adaptor component ClpS of chloroplast Clp-type protease complex 0.02 Archaeplastida
Pp3c20_21920V3.1 No alias Ribosomal protein L12/ ATP-dependent Clp protease... 0.03 Archaeplastida
Smo69252 No alias Protein degradation.peptidase families.serine-type... 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0030163 protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006766 vitamin metabolic process IEP Neighborhood
BP GO:0006767 water-soluble vitamin metabolic process IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0008519 ammonium transmembrane transporter activity IEP Neighborhood
BP GO:0009235 cobalamin metabolic process IEP Neighborhood
BP GO:0015696 ammonium transport IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
MF GO:2001070 starch binding IEP Neighborhood
InterPro domains Description Start Stop
IPR003769 ClpS_core 82 149
No external refs found!