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  5. AMTR_s00056p00099370

AMTR_s00056p00099370 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00056.73

No description available


Gene families : OG0001628 (Archaeplastida) Phylogenetic Tree(s): OG0001628_tree ,
OG_05_0001043 (LandPlants) Phylogenetic Tree(s): OG_05_0001043_tree ,
OG_06_0000525 (SeedPlants) Phylogenetic Tree(s): OG_06_0000525_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00056p00099370
Cluster HCCA: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
AT3G16330 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 Archaeplastida
AT4G29110 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.04 Archaeplastida
GSVIVT01032948001 No alias No description available 0.03 Archaeplastida
Gb_01993 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_29515 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os01g70500.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os05g11160.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_19276g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_7981g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc01g079660.2.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc06g066490.1.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc06g066500.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc06g066520.1.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc12g008380.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc12g044420.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e026877_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e037235_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0004594 pantothenate kinase activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
CC GO:0005788 endoplasmic reticulum lumen IEP Neighborhood
BP GO:0006835 dicarboxylic acid transport IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0009690 cytokinin metabolic process IEP Neighborhood
BP GO:0010817 regulation of hormone levels IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015740 C4-dicarboxylate transport IEP Neighborhood
BP GO:0015743 malate transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
BP GO:0015936 coenzyme A metabolic process IEP Neighborhood
BP GO:0015937 coenzyme A biosynthetic process IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0019139 cytokinin dehydrogenase activity IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP Neighborhood
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP Neighborhood
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP Neighborhood
BP GO:0034754 cellular hormone metabolic process IEP Neighborhood
BP GO:0042445 hormone metabolic process IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
InterPro domains Description Start Stop
IPR008480 DUF761_pln 187 206
No external refs found!