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  5. AMTR_s00056p00101740

AMTR_s00056p00101740 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00056.75

Description : Vesicle trafficking.target membrane tethering.Golgi membrane tethering factors.GC1-type golgin


Gene families : OG0006326 (Archaeplastida) Phylogenetic Tree(s): OG0006326_tree ,
OG_05_0006467 (LandPlants) Phylogenetic Tree(s): OG_05_0006467_tree ,
OG_06_0006874 (SeedPlants) Phylogenetic Tree(s): OG_06_0006874_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00056p00101740
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g54119.1 No alias golgin (GC1) 0.04 Archaeplastida
Zm00001e019844_P001 No alias golgin (GC1) 0.04 Archaeplastida
Zm00001e029063_P003 No alias golgin (GC1) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
CC GO:0016459 myosin complex IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!