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  5. AMTR_s00056p00130690

AMTR_s00056p00130690 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00056.99

Description : Protein biosynthesis.aminoacyl-tRNA synthetase activities.tryptophan-tRNA ligase


Gene families : OG0006556 (Archaeplastida) Phylogenetic Tree(s): OG0006556_tree ,
OG_05_0008186 (LandPlants) Phylogenetic Tree(s): OG_05_0008186_tree ,
OG_06_0008305 (SeedPlants) Phylogenetic Tree(s): OG_06_0008305_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00056p00130690
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
Cre05.g238322 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0005737 cytoplasm IEA Interproscan
BP GO:0006418 tRNA aminoacylation for protein translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002305 aa-tRNA-synth_Ic 67 359
No external refs found!