Cre17.g714100

Description : Chromatin organisation.histones.H2A-type histone

Gene families : OG0000174 (Archaeplastida) Phylogenetic Tree(s): OG0000174_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre17.g714100
Cluster	HCCA: Cluster_97

Target	Alias	Description	ECC score	Gene Family Method	Actions
Zm00001e034815_P001	No alias	histone (H2A)	0.01	Archaeplastida
Zm00001e038465_P002	No alias	histone (H2A)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0032993	protein-DNA complex	None	Extended
CC	GO:0044422	organelle part	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044427	chromosomal part	None	Extended
CC	GO:0044446	intracellular organelle part	None	Extended
CC	GO:0044464	cell part	None	Extended
CC	GO:0044815	DNA packaging complex	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004609	phosphatidylserine decarboxylase activity	IEP	Neighborhood
MF	GO:0008519	ammonium transmembrane transporter activity	IEP	Neighborhood
BP	GO:0008654	phospholipid biosynthetic process	IEP	Neighborhood
BP	GO:0015696	ammonium transport	IEP	Neighborhood
MF	GO:0016831	carboxy-lyase activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR007125	Histone_H2A/H2B/H3	9	88
IPR032454	Histone_H2A_C	91	124

External Links

No external refs found!