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Aliases : evm_27.TU.AmTr_v1.0_scaffold00056.112
Description : Senescence/dehydration-associated protein At4g35985, chloroplastic OS=Arabidopsis thaliana
Gene families : OG0000668 (Archaeplastida) Phylogenetic Tree(s): OG0000668_tree ,
OG_05_0000954 (LandPlants) Phylogenetic Tree(s): OG_05_0000954_tree ,
OG_06_0002317 (SeedPlants) Phylogenetic Tree(s): OG_06_0002317_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00056p00140490 | |
| Cluster | HCCA: Cluster_150 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G21600 | No alias | Senescence/dehydration-associated protein-related | 0.03 | Archaeplastida | |
| GSVIVT01015304001 | No alias | Senescence/dehydration-associated protein At4g35985,... | 0.03 | Archaeplastida | |
| Gb_39730 | No alias | Senescence/dehydration-associated protein At4g35985,... | 0.02 | Archaeplastida | |
| Gb_39732 | No alias | Senescence/dehydration-associated protein At4g35985,... | 0.03 | Archaeplastida | |
| LOC_Os01g52480.1 | No alias | Senescence/dehydration-associated protein At4g35985,... | 0.04 | Archaeplastida | |
| MA_460372g0010 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| Pp3c22_6990V3.1 | No alias | Senescence/dehydration-associated protein-related | 0.02 | Archaeplastida | |
| Pp3c2_37270V3.1 | No alias | Senescence/dehydration-associated protein-related | 0.03 | Archaeplastida | |
| Solyc02g062100.4.1 | No alias | Protein EARLY-RESPONSIVE TO DEHYDRATION 7, chloroplastic... | 0.03 | Archaeplastida | |
| Solyc02g083690.2.1 | No alias | Protein EARLY-RESPONSIVE TO DEHYDRATION 7, chloroplastic... | 0.04 | Archaeplastida | |
| Solyc12g008460.2.1 | No alias | Senescence/dehydration-associated protein At4g35985,... | 0.04 | Archaeplastida | |
| Zm00001e028202_P001 | No alias | Senescence/dehydration-associated protein At4g35985,... | 0.06 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003677 | DNA binding | IEP | Neighborhood |
| MF | GO:0004197 | cysteine-type endopeptidase activity | IEP | Neighborhood |
| MF | GO:0004497 | monooxygenase activity | IEP | Neighborhood |
| MF | GO:0004499 | N,N-dimethylaniline monooxygenase activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
| MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
| BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
| MF | GO:0016709 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | IEP | Neighborhood |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
| MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| MF | GO:0043168 | anion binding | IEP | Neighborhood |
| MF | GO:0043169 | cation binding | IEP | Neighborhood |
| MF | GO:0043531 | ADP binding | IEP | Neighborhood |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | Neighborhood |
| MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
| MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
| BP | GO:0050789 | regulation of biological process | IEP | Neighborhood |
| BP | GO:0050794 | regulation of cellular process | IEP | Neighborhood |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0065007 | biological regulation | IEP | Neighborhood |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR009686 | Senescence/spartin | 1 | 112 |
| No external refs found! |