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  5. Cre17.g721500

Cre17.g721500


Description : Carbohydrate metabolism.starch metabolism.synthesis.starch synthase activities.granule-bound starch (amylose) synthase


Gene families : OG0000161 (Archaeplastida) Phylogenetic Tree(s): OG0000161_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre17.g721500
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00100p00051890 evm_27.TU.AmTr_v1... Carbohydrate metabolism.starch... 0.02 Archaeplastida
AMTR_s00189p00041140 evm_27.TU.AmTr_v1... Carbohydrate metabolism.starch... 0.02 Archaeplastida
AT1G11720 ATSS3, SS3 starch synthase 3 0.03 Archaeplastida
AT1G32900 No alias UDP-Glycosyltransferase superfamily protein 0.02 Archaeplastida
GSVIVT01012723001 No alias Carbohydrate metabolism.starch... 0.03 Archaeplastida
Gb_26227 No alias granule-bound starch (amylose) synthase 0.02 Archaeplastida
Gb_37508 No alias Probable starch synthase 4, chloroplastic/amyloplastic... 0.01 Archaeplastida
LOC_Os02g51070.1 No alias starch synthase (SSII) 0.01 Archaeplastida
LOC_Os04g53310.1 No alias starch synthase (SSIII) 0.03 Archaeplastida
MA_10437241g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_482181g0010 No alias Soluble starch synthase 1, chloroplastic/amyloplastic... 0.02 Archaeplastida
MA_675870g0010 No alias Soluble starch synthase 3, chloroplastic/amyloplastic... 0.04 Archaeplastida
Mp2g08030.1 No alias Probable starch synthase 4, chloroplastic/amyloplastic... 0.04 Archaeplastida
Pp3c19_7710V3.1 No alias starch synthase 2 0.04 Archaeplastida
Smo149847 No alias Carbohydrate metabolism.starch... 0.04 Archaeplastida
Smo154776 No alias Carbohydrate metabolism.starch... 0.01 Archaeplastida
Solyc02g080570.3.1 No alias starch synthase (SSIII) 0.05 Archaeplastida
Solyc02g088000.3.1 No alias starch synthase (SSII) 0.02 Archaeplastida
Zm00001e012782_P002 No alias starch synthase (SSII) 0.02 Archaeplastida
Zm00001e039962_P001 No alias starch synthase (SSIII) 0.02 Archaeplastida
Zm00001e041682_P002 No alias starch synthase (SSIII) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP Neighborhood
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP Neighborhood
MF GO:0005347 ATP transmembrane transporter activity IEP Neighborhood
MF GO:0005471 ATP:ADP antiporter activity IEP Neighborhood
BP GO:0006862 nucleotide transport IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
MF GO:0008514 organic anion transmembrane transporter activity IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
MF GO:0010181 FMN binding IEP Neighborhood
MF GO:0015215 nucleotide transmembrane transporter activity IEP Neighborhood
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP Neighborhood
MF GO:0015217 ADP transmembrane transporter activity IEP Neighborhood
MF GO:0015238 drug transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
MF GO:0015301 anion:anion antiporter activity IEP Neighborhood
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP Neighborhood
BP GO:0015748 organophosphate ester transport IEP Neighborhood
BP GO:0015931 nucleobase-containing compound transport IEP Neighborhood
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
BP GO:0030163 protein catabolic process IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0099516 ion antiporter activity IEP Neighborhood
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
MF GO:2001070 starch binding IEP Neighborhood
InterPro domains Description Start Stop
IPR013534 Starch_synth_cat_dom 79 343
IPR001296 Glyco_trans_1 396 536
No external refs found!