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  5. Cre17.g725200

Cre17.g725200


Description : ABC transporter B family member 12 OS=Arabidopsis thaliana


Gene families : OG0000057 (Archaeplastida) Phylogenetic Tree(s): OG0000057_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre17.g725200
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000741.4 No alias ABC transporter B family member 21 OS=Arabidopsis thaliana 0.01 Archaeplastida
GSVIVT01009946001 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
LOC_Os01g50080.1 No alias subfamily ABCB transporter 0.01 Archaeplastida
LOC_Os08g45030.1 No alias subfamily ABCB transporter 0.01 Archaeplastida
Smo176522 No alias Solute transport.primary active transport.ABC... 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 1182 1330
IPR011527 ABC1_TM_dom 839 1112
IPR011527 ABC1_TM_dom 60 331
IPR003439 ABC_transporter-like 451 599
No external refs found!