Cre17.g727350

Description : Protein biosynthesis.organelle translation machineries.mitochondrial ribosome.large subunit proteome.mtRPL23 component

Gene families : OG0006663 (Archaeplastida) Phylogenetic Tree(s): OG0006663_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre17.g727350
Cluster	HCCA: Cluster_82

Target	Alias	Description	ECC score	Gene Family Method	Actions
Zm00001e016493_P001	No alias	component mtRPL23 of large ribosomal subunit proteome	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	Neighborhood
MF	GO:0003743	translation initiation factor activity	IEP	Neighborhood
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	Neighborhood
CC	GO:0005622	intracellular	IEP	Neighborhood
MF	GO:0008135	translation factor activity, RNA binding	IEP	Neighborhood
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	Neighborhood
MF	GO:0016670	oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor	IEP	Neighborhood
MF	GO:0016859	cis-trans isomerase activity	IEP	Neighborhood
MF	GO:0016972	thiol oxidase activity	IEP	Neighborhood
BP	GO:0018208	peptidyl-proline modification	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR013025	Ribosomal_L25/23	18	82

External Links

No external refs found!

Cre17.g727350

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation