1. Home
  2. Species
  3. Chlamydomonas reinhardtii
  4. Sequence
  5. Cre17.g728150

Cre17.g728150


Description : Vesicle trafficking.SNARE target membrane recognition and fusion complexes.R-type SNARE longin components.YKT6-type protein


Gene families : OG0003416 (Archaeplastida) Phylogenetic Tree(s): OG0003416_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre17.g728150
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020554.58 No alias VAMP-like protein YKT61 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01003730001 No alias Vesicle trafficking.SNARE target membrane recognition... 0.04 Archaeplastida
LOC_Os01g64650.2 No alias YKT6-type R-type SNARE longin protein 0.03 Archaeplastida
MA_100977g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_252882g0010 No alias VAMP-like protein YKT61 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_827461g0010 No alias VAMP-like protein YKT61 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Smo166326 No alias Vesicle trafficking.SNARE target membrane recognition... 0.02 Archaeplastida
Solyc07g005200.3.1 No alias YKT6-type R-type SNARE longin protein 0.03 Archaeplastida
Zm00001e028669_P001 No alias YKT6-type R-type SNARE longin protein 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
BP GO:0016197 endosomal transport IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
CC GO:0036452 ESCRT complex IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044440 endosomal part IEP Neighborhood
BP GO:0071985 multivesicular body sorting pathway IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001388 Synaptobrevin 140 196
IPR010908 Longin_dom 46 116
No external refs found!