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No description available
Gene families : OG0000043 (Archaeplastida) Phylogenetic Tree(s): OG0000043_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre17.g729150 | |
| Cluster | HCCA: Cluster_92 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00030p00132070 | evm_27.TU.AmTr_v1... | Glycine-rich RNA-binding protein RZ1A OS=Arabidopsis thaliana | 0.01 | Archaeplastida | |
| AT1G60650 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein with... | 0.02 | Archaeplastida | |
| AT2G37510 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.02 | Archaeplastida | |
| Cpa|evm.model.tig00020904.44 | No alias | Splicing factor-like protein 1 OS=Arabidopsis thaliana | 0.02 | Archaeplastida | |
| MA_10436424g0010 | No alias | RNA chaperone (RZ1|GR-RBP) | 0.01 | Archaeplastida | |
| MA_168323g0010 | No alias | RNA chaperone (RZ1|GR-RBP) | 0.01 | Archaeplastida | |
| Mp6g08160.1 | No alias | RNA chaperone (RZ1|GR-RBP) | 0.05 | Archaeplastida | |
| Pp3c12_1830V3.1 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein with... | 0.03 | Archaeplastida | |
| Pp3c12_23410V3.1 | No alias | glycine-rich RNA-binding protein 3 | 0.02 | Archaeplastida | |
| Pp3c12_23420V3.1 | No alias | glycine-rich RNA-binding protein 3 | 0.02 | Archaeplastida | |
| Solyc03g071560.4.1 | No alias | RNA chaperone (RZ1|GR-RBP) | 0.05 | Archaeplastida | |
| Solyc10g047130.2.1 | No alias | RNA chaperone (RZ1|GR-RBP) | 0.01 | Archaeplastida | |
| Solyc11g008210.3.1 | No alias | Glycine-rich RNA-binding protein RZ1B OS=Arabidopsis... | 0.04 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
| MF | GO:0003723 | RNA binding | IEP | Neighborhood |
| MF | GO:0003743 | translation initiation factor activity | IEP | Neighborhood |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Neighborhood |
| MF | GO:0004817 | cysteine-tRNA ligase activity | IEP | Neighborhood |
| MF | GO:0005524 | ATP binding | IEP | Neighborhood |
| CC | GO:0005737 | cytoplasm | IEP | Neighborhood |
| BP | GO:0006082 | organic acid metabolic process | IEP | Neighborhood |
| BP | GO:0006399 | tRNA metabolic process | IEP | Neighborhood |
| BP | GO:0006413 | translational initiation | IEP | Neighborhood |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Neighborhood |
| BP | GO:0006423 | cysteinyl-tRNA aminoacylation | IEP | Neighborhood |
| BP | GO:0006520 | cellular amino acid metabolic process | IEP | Neighborhood |
| BP | GO:0006886 | intracellular protein transport | IEP | Neighborhood |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | Neighborhood |
| MF | GO:0008144 | drug binding | IEP | Neighborhood |
| BP | GO:0009987 | cellular process | IEP | Neighborhood |
| BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
| MF | GO:0016874 | ligase activity | IEP | Neighborhood |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Neighborhood |
| MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | Neighborhood |
| CC | GO:0030117 | membrane coat | IEP | Neighborhood |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
| MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Neighborhood |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
| MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
| BP | GO:0043038 | amino acid activation | IEP | Neighborhood |
| BP | GO:0043039 | tRNA aminoacylation | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| MF | GO:0043168 | anion binding | IEP | Neighborhood |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0043436 | oxoacid metabolic process | IEP | Neighborhood |
| BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
| BP | GO:0044281 | small molecule metabolic process | IEP | Neighborhood |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Neighborhood |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Neighborhood |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000504 | RRM_dom | 19 | 87 |
| No external refs found! |