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  5. AMTR_s00056p00160320

AMTR_s00056p00160320 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00056.137

Description : Cytoskeleton.microfilament network.actin polymerisation.profilin actin nucleation protein


Gene families : OG0001070 (Archaeplastida) Phylogenetic Tree(s): OG0001070_tree ,
OG_05_0001188 (LandPlants) Phylogenetic Tree(s): OG_05_0001188_tree ,
OG_06_0001247 (SeedPlants) Phylogenetic Tree(s): OG_06_0001247_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00056p00160320
Cluster HCCA: Cluster_210

Target Alias Description ECC score Gene Family Method Actions
Cre10.g427250 No alias Cytoskeleton.microfilament network.actin... 0.03 Archaeplastida
LOC_Os06g05880.1 No alias profilin actin nucleation protein 0.03 Archaeplastida
Mp6g13930.1 No alias profilin actin nucleation protein 0.04 Archaeplastida
Mp8g06710.1 No alias profilin actin nucleation protein 0.04 Archaeplastida
Pp3c18_17930V3.1 No alias profilin 3 0.05 Archaeplastida
Zm00001e036481_P001 No alias profilin actin nucleation protein 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEA Interproscan
BP GO:0030036 actin cytoskeleton organization IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0004356 glutamate-ammonia ligase activity IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006414 translational elongation IEP Neighborhood
BP GO:0006541 glutamine metabolic process IEP Neighborhood
BP GO:0006542 glutamine biosynthetic process IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0009064 glutamine family amino acid metabolic process IEP Neighborhood
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Neighborhood
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Neighborhood
MF GO:0016211 ammonia ligase activity IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Neighborhood
MF GO:0016881 acid-amino acid ligase activity IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
InterPro domains Description Start Stop
IPR005455 PFN 2 126
No external refs found!