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  5. AMTR_s00056p00186500

AMTR_s00056p00186500 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00056.167

Description : Vesicle trafficking.endomembrane trafficking.vacuolar sorting.AP-4 vacuole cargo adaptor complex.AP4S small sigma subunit


Gene families : OG0000560 (Archaeplastida) Phylogenetic Tree(s): OG0000560_tree ,
OG_05_0007286 (LandPlants) Phylogenetic Tree(s): OG_05_0007286_tree ,
OG_06_0008306 (SeedPlants) Phylogenetic Tree(s): OG_06_0008306_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00056p00186500
Cluster HCCA: Cluster_224

Target Alias Description ECC score Gene Family Method Actions
Pp3c4_27730V3.1 No alias associated protein 19 0.03 Archaeplastida
Zm00001e038638_P001 No alias small subunit sigma of AP-3 Golgi to vacuole cargo... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006732 coenzyme metabolic process IEP Neighborhood
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP Neighborhood
MF GO:0008172 S-methyltransferase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
MF GO:0008898 S-adenosylmethionine-homocysteine S-methyltransferase activity IEP Neighborhood
BP GO:0009108 coenzyme biosynthetic process IEP Neighborhood
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP Neighborhood
BP GO:0043545 molybdopterin cofactor metabolic process IEP Neighborhood
BP GO:0051188 cofactor biosynthetic process IEP Neighborhood
BP GO:0051189 prosthetic group metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR022775 AP_mu_sigma_su 3 142
No external refs found!