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Description : Pumilio homolog 3 OS=Arabidopsis thaliana
Gene families : OG0000536 (Archaeplastida) Phylogenetic Tree(s): OG0000536_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre17.g746647 | |
| Cluster | HCCA: Cluster_48 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G10360 | APUM4, PUM4 | pumilio 4 | 0.02 | Archaeplastida | |
| GSVIVT01016236001 | No alias | Pumilio homolog 4 OS=Arabidopsis thaliana | 0.02 | Archaeplastida | |
| Gb_39566 | No alias | Pumilio homolog 5 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
| MA_9025256g0010 | No alias | Pumilio homolog 5 OS=Arabidopsis thaliana... | 0.02 | Archaeplastida | |
| Solyc06g005670.4.1 | No alias | Pumilio homolog 1 OS=Arabidopsis thaliana... | 0.02 | Archaeplastida | |
| Zm00001e016242_P002 | No alias | Pumilio homolog 4 OS=Arabidopsis thaliana... | 0.01 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004180 | carboxypeptidase activity | IEP | Neighborhood |
| MF | GO:0004181 | metallocarboxypeptidase activity | IEP | Neighborhood |
| MF | GO:0004527 | exonuclease activity | IEP | Neighborhood |
| MF | GO:0004672 | protein kinase activity | IEP | Neighborhood |
| BP | GO:0006464 | cellular protein modification process | IEP | Neighborhood |
| BP | GO:0006468 | protein phosphorylation | IEP | Neighborhood |
| BP | GO:0006793 | phosphorus metabolic process | IEP | Neighborhood |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0006855 | drug transmembrane transport | IEP | Neighborhood |
| MF | GO:0008235 | metalloexopeptidase activity | IEP | Neighborhood |
| MF | GO:0008238 | exopeptidase activity | IEP | Neighborhood |
| MF | GO:0015238 | drug transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015297 | antiporter activity | IEP | Neighborhood |
| BP | GO:0015893 | drug transport | IEP | Neighborhood |
| MF | GO:0016301 | kinase activity | IEP | Neighborhood |
| BP | GO:0016310 | phosphorylation | IEP | Neighborhood |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Neighborhood |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Neighborhood |
| BP | GO:0019538 | protein metabolic process | IEP | Neighborhood |
| MF | GO:0019825 | oxygen binding | IEP | Neighborhood |
| BP | GO:0036211 | protein modification process | IEP | Neighborhood |
| BP | GO:0043412 | macromolecule modification | IEP | Neighborhood |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Neighborhood |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001313 | Pumilio_RNA-bd_rpt | 983 | 1013 |
| IPR001313 | Pumilio_RNA-bd_rpt | 1095 | 1121 |
| IPR001313 | Pumilio_RNA-bd_rpt | 1059 | 1079 |
| IPR001313 | Pumilio_RNA-bd_rpt | 1020 | 1044 |
| IPR001313 | Pumilio_RNA-bd_rpt | 910 | 933 |
| IPR001313 | Pumilio_RNA-bd_rpt | 1199 | 1222 |
| IPR001313 | Pumilio_RNA-bd_rpt | 948 | 976 |
| No external refs found! |