1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00056p00210540

AMTR_s00056p00210540 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00056.201

Description : Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-D-glucuronic acid synthesis.myo-inositol oxidation pathway (MIOP).myo-inositol oxygenase


Gene families : OG0002923 (Archaeplastida) Phylogenetic Tree(s): OG0002923_tree ,
OG_05_0002536 (LandPlants) Phylogenetic Tree(s): OG_05_0002536_tree ,
OG_06_0002825 (SeedPlants) Phylogenetic Tree(s): OG_06_0002825_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00056p00210540
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01015266001 No alias Carbohydrate metabolism.nucleotide sugar... 0.04 Archaeplastida
MA_50593g0010 No alias myo-inositol oxygenase 0.03 Archaeplastida
Solyc12g008650.2.1 No alias myo-inositol oxygenase 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA Interproscan
CC GO:0005737 cytoplasm IEA Interproscan
BP GO:0019310 inositol catabolic process IEA Interproscan
MF GO:0050113 inositol oxygenase activity IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR007828 Inositol_oxygenase 49 293
No external refs found!