Cre48.g761197


Description : Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL3 component


Gene families : OG0006666 (Archaeplastida) Phylogenetic Tree(s): OG0006666_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre48.g761197
Cluster HCCA: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00166020 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.02 Archaeplastida
AT2G43030 No alias Ribosomal protein L3 family protein 0.22 Archaeplastida
GSVIVT01019355001 No alias 50S ribosomal protein L3, chloroplastic OS=Spinacia oleracea 0.12 Archaeplastida
Gb_26251 No alias component psRPL3 of large ribosomal subunit proteome 0.12 Archaeplastida
LOC_Os02g04460.1 No alias component psRPL3 of large ribosomal subunit proteome 0.16 Archaeplastida
MA_10432831g0010 No alias component psRPL3 of large ribosomal subunit proteome 0.09 Archaeplastida
Mp1g03320.1 No alias component psRPL3 of large ribosomal subunit proteome 0.25 Archaeplastida
Pp3c16_1020V3.1 No alias Ribosomal protein L3 family protein 0.15 Archaeplastida
Pp3c6_28830V3.1 No alias Ribosomal protein L3 family protein 0.21 Archaeplastida
Smo430901 No alias Protein biosynthesis.organelle translation... 0.05 Archaeplastida
Solyc06g051200.3.1 No alias component psRPL3 of large ribosomal subunit proteome 0.16 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005622 intracellular IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003747 translation release factor activity IEP Neighborhood
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Neighborhood
BP GO:0006066 alcohol metabolic process IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006415 translational termination IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
BP GO:0006729 tetrahydrobiopterin biosynthetic process IEP Neighborhood
MF GO:0008079 translation termination factor activity IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
MF GO:0008483 transaminase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
BP GO:0019751 polyol metabolic process IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
BP GO:0022411 cellular component disassembly IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
BP GO:0032984 protein-containing complex disassembly IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0034311 diol metabolic process IEP Neighborhood
BP GO:0034312 diol biosynthetic process IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0042558 pteridine-containing compound metabolic process IEP Neighborhood
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0043624 cellular protein complex disassembly IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046146 tetrahydrobiopterin metabolic process IEP Neighborhood
BP GO:0046165 alcohol biosynthetic process IEP Neighborhood
BP GO:0046173 polyol biosynthetic process IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0070402 NADPH binding IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901615 organic hydroxy compound metabolic process IEP Neighborhood
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000597 Ribosomal_L3 141 229
No external refs found!