AMTR_s00056p00216040

Description : TMV resistance protein N OS=Nicotiana glutinosa

Gene families : OG0000061 (Archaeplastida) Phylogenetic Tree(s): OG0000061_tree ,
OG_05_0000077 (LandPlants) Phylogenetic Tree(s): OG_05_0000077_tree ,
OG_06_0001536 (SeedPlants) Phylogenetic Tree(s): OG_06_0001536_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00056p00216040
Cluster	HCCA: Cluster_29

Target	Alias	Description	ECC score	Gene Family Method
AT1G63860	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.02	Archaeplastida
Cre06.g278118	No alias	No description available	0.01	Archaeplastida
GSVIVT01025907001	No alias	External stimuli response.biotic stress.pathogen...	0.02	Archaeplastida
GSVIVT01034461001	No alias	TMV resistance protein N OS=Nicotiana glutinosa	0.04	Archaeplastida
Gb_05909	No alias	TMV resistance protein N OS=Nicotiana glutinosa...	0.02	Archaeplastida
Gb_21493	No alias	TMV resistance protein N OS=Nicotiana glutinosa...	0.03	Archaeplastida
Gb_40939	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_123242g0010	No alias	effector receptor (NLR)	0.05	Archaeplastida
Solyc07g055380.1.1	No alias	effector receptor (NLR)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
BP	GO:0007165	signal transduction	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	Neighborhood
MF	GO:0008270	zinc ion binding	IEP	Neighborhood
MF	GO:0016859	cis-trans isomerase activity	IEP	Neighborhood
MF	GO:0043169	cation binding	IEP	Neighborhood
MF	GO:0046872	metal ion binding	IEP	Neighborhood
MF	GO:0046914	transition metal ion binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	163	371
IPR000157	TIR_dom	6	110

External Links

No external refs found!