AMTR_s00057p00026390 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00057.10

Description : Dynein assembly factor with WDR repeat domains 1 OS=Chlamydomonas reinhardtii


Gene families : OG0004576 (Archaeplastida) Phylogenetic Tree(s): OG0004576_tree ,
OG_05_0004230 (LandPlants) Phylogenetic Tree(s): OG_05_0004230_tree ,
OG_06_0004076 (SeedPlants) Phylogenetic Tree(s): OG_06_0004076_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00057p00026390
Cluster HCCA: Cluster_228

Target Alias Description ECC score Gene Family Method Actions
AT5G49430 No alias WD40/YVTN repeat-like-containing domain;Bromodomain 0.02 Archaeplastida
GSVIVT01035014001 No alias Dynein assembly factor with WDR repeat domains 1... 0.03 Archaeplastida
MA_58934g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc01g060040.3.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc01g079510.3.1 No alias Dynein assembly factor with WDR repeat domains 1... 0.02 Archaeplastida
Zm00001e025834_P004 No alias Dynein assembly factor with WDR repeat domains 1... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005643 nuclear pore IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
MF GO:0008565 protein transporter activity IEP Neighborhood
MF GO:0016407 acetyltransferase activity IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 382 422
IPR001680 WD40_repeat 300 335
IPR001680 WD40_repeat 508 566
IPR001680 WD40_repeat 643 681
IPR001680 WD40_repeat 459 490
IPR001680 WD40_repeat 341 376
IPR001487 Bromodomain 1771 1825
No external refs found!